DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CanA1 and TOPP1

DIOPT Version :10

Sequence 1:NP_524600.3 Gene:CanA1 / 43670 FlyBaseID:FBgn0010015 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_180501.1 Gene:TOPP1 / 817489 AraportID:AT2G29400 Length:318 Species:Arabidopsis thaliana


Alignment Length:302 Identity:118/302 - (39%)
Similarity:174/302 - (57%) Gaps:32/302 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 PKTGKPNFDALRQHFLLEGRIEEAVALRIITEGAALLREEKNMIDVEAPITVCGDIHGQFFDLVK 140
            |.:||       |..|.||.|.:..|:     ...:..::.|::::||||.:|||||||:.||::
plant    35 PGSGK-------QVHLSEGEIRQLCAV-----SKEIFLQQPNLLELEAPIKICGDIHGQYSDLLR 87

  Fly   141 LFEVGGPPATTRYLFLGDYVDRGYFSIECVLYLWSLKITYPTTLSLLRGNHECRHLTEYFTFKQE 205
            |||.||.|....|||||||||||..|:|.:..|.:.||.||....|||||||...:...:.|..|
plant    88 LFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHESASINRIYGFYDE 152

  Fly   206 CIIKYSESIYDACMEAFDCLPLAALLNQQFLCIHGGLSPEIFTLDDIKTLNRFREPPAYGPMCDL 270
            |..:::..::....:.|:|||:|||::.:.||:|||:|||:.:||.|:.:.|..:.|..|.:|||
plant   153 CKRRFNVRLWKIFTDCFNCLPVAALIDDRILCMHGGISPELKSLDQIRNIARPMDIPESGLVCDL 217

  Fly   271 LWSDPLEDFGNEKTNEFFSHNSVRGCSYFFSYSACCEFLQKNNLLSIVRAHEAQDAGYRMYRKNQ 335
            |||||..|.|       :..|. ||.||.|......|||:|:::..|.|||:..:.||..:.:.|
plant   218 LWSDPSGDVG-------WGMND-RGVSYTFGADKVAEFLEKHDMDLICRAHQVVEDGYEFFAERQ 274

  Fly   336 VTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCS 377
                  |:|:||||||...::|..|::..:.::|      ||
plant   275 ------LVTVFSAPNYCGEFDNAGAMMSIDESLM------CS 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanA1NP_524600.3 MPP_PP2B 81..385 CDD:277361 115/297 (39%)
TOPP1NP_180501.1 MPP_PP1_PPKL 19..310 CDD:277359 118/302 (39%)

Return to query results.
Submit another query.