DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CanA1 and ppef1

DIOPT Version :9

Sequence 1:NP_001247378.2 Gene:CanA1 / 43670 FlyBaseID:FBgn0010015 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_021335306.1 Gene:ppef1 / 559132 ZFINID:ZDB-GENE-080303-27 Length:729 Species:Danio rerio


Alignment Length:583 Identity:133/583 - (22%)
Similarity:216/583 - (37%) Gaps:182/583 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 MVDDVPLPPT--------HKLTMSEVYDDPKTGKP----NFDALRQHFLLEGRIEEAVALRIITE 107
            ::|.|..|.|        .::.:.|.|..|:...|    :.:||...|..|..:.....|:::.|
Zfish    98 LLDSVVDPLTEEVRQLKYEQIMVPESYSGPRLSFPLSVTDTNALLSAFKEEQTLHGKYVLQLLYE 162

  Fly   108 GAALLREEKNMIDVEA----PITVCGDIHGQFFDLVKLFEVGG-PPATTRYLFLGDYVDRGYFSI 167
            ....|::..|:|.:..    .||:|||:||:..||:.:|...| |.|...|:|.||:||||..|.
Zfish   163 TKKFLKQMPNVIYLSTSYAKEITICGDLHGRLDDLLLIFYKNGLPSAENPYIFNGDFVDRGKKST 227

  Fly   168 ECVLYLWSLKITYPTTLSLLRGNHECRHLTEYFTFKQECIIKY---SESIYDACMEAFDCLPLAA 229
            |.::.|::..:.||..:.|.|||||...:...:.|.:|.:.||   ...|.....:.|..||:|.
Zfish   228 EIIIILFAFVLLYPDHMHLNRGNHEDHIMNLRYGFTREVMQKYKTHGREILQLLQDVFSLLPVAT 292

  Fly   230 LLNQQFLCIHGGLSPEIFTLDDIKTLNRFR----------------------------------- 259
            :::.:.|.:|||:|.:. .||.:.|:.|.:                                   
Zfish   293 VIDNKVLIVHGGISDKT-DLDFLSTVERHKVKSALRLPKRSTDHLTVRSCSRSSSRNRGRNSRSS 356

  Fly   260 ----------------------------------------------------------------- 259
                                                                             
Zfish   357 SRHSSRSRRKKLSKQGSRSSSSSSSSSSSSSMCSPRVSAKNTPRRPPPSPTDMLQVPFLDSFVSL 421

  Fly   260 EPP-------AYGPMCDLLWSDPLEDFGNEKTNEFFSHNSVRGCSYFFSYSACCEFLQKNNLLSI 317
            |||       .:..:.|:|||||....|       .|.||.||...:|........|||:.|..:
Zfish   422 EPPELPREELEWQQVVDILWSDPKHQNG-------CSPNSFRGGGCYFGPDVTQTLLQKHGLCLL 479

  Fly   318 VRAHEAQDAGYRMYRKNQVTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYW 382
            :|:||.:..||.:....||      ||||||.||.:..:|:.|.:|.              .|..
Zfish   480 IRSHECKQEGYELCHNGQV------ITIFSASNYYEEGSNRGAYVKL--------------GPEL 524

  Fly   383 LPNFMDVFTWSLPFVGEKVTEMLVNILNICSDDELVAGPDDELEEEL---RKKIVLVPANASNNN 444
            :|.|   |.:.:.....|:|  |...:.:.....|.|     |:|:|   |.:::........||
Zfish   525 VPRF---FQYQVSRSTRKLT--LHQRVRVAEGSALRA-----LKEKLYAHRSELMAAFQQYDINN 579

  Fly   445 NNNNTPSKPASM--SALRKEI----IRNKIRAIGKMSRVFSILREESESVLQLKGLTPTGALP 501
            ....:.|:.|.:  |.||.::    :|.::..:|....|      |.||..:  .::|...:|
Zfish   580 TGRISTSEWAQVVESVLRLDLPWRTLRPRLARLGTDGNV------EYESCFE--DISPGEPIP 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanA1NP_001247378.2 MPP_PP2B 81..385 CDD:277361 99/422 (23%)
PP2Ac 98..369 CDD:197547 93/385 (24%)
ppef1XP_021335306.1 IQ 32..54 CDD:197470
MPP_RdgC 132..532 CDD:277364 102/430 (24%)
EFh_PEF 567..715 CDD:330173 15/76 (20%)
EF-hand motif 567..600 CDD:320054 7/32 (22%)
EF-hand motif 609..649 CDD:320054 7/34 (21%)
EFh 650..716 CDD:238008
EF-hand motif 650..683 CDD:320054
EF-hand motif 690..719 CDD:320054
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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