DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CanA1 and ppp3cca

DIOPT Version :9

Sequence 1:NP_001247378.2 Gene:CanA1 / 43670 FlyBaseID:FBgn0010015 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_005171933.1 Gene:ppp3cca / 557926 ZFINID:ZDB-GENE-030829-36 Length:508 Species:Danio rerio


Alignment Length:549 Identity:365/549 - (66%)
Similarity:426/549 - (77%) Gaps:52/549 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SSKSPTAASGNKQKMQYTKTRERMVDDVPLPPTHKLTMSEVYDDPKTGKPNFDALRQHFLLEGRI 96
            |:|.|      |:|:   .|.||::..|||||..:||:.::|.|   ||||.:.|:.|.:.|||:
Zfish     2 STKEP------KEKL---STTERIIKTVPLPPHQRLTIKDLYVD---GKPNTELLKNHLIKEGRV 54

  Fly    97 EEAVALRIITEGAALLREEKNMIDVEAPITVCGDIHGQFFDLVKLFEVGGPPATTRYLFLGDYVD 161
            ||..|||||.:||.:||:||.|::||||||||||:|||||||:|||||||.|..|||||||||||
Zfish    55 EEDAALRIINDGANILRQEKCMLEVEAPITVCGDVHGQFFDLMKLFEVGGSPDNTRYLFLGDYVD 119

  Fly   162 RGYFSIECVLYLWSLKITYPTTLSLLRGNHECRHLTEYFTFKQECIIKYSESIYDACMEAFDCLP 226
            ||||||||||:||:|||.:|.||.|||||||||||||||||||||.|||||.:||||||||||||
Zfish   120 RGYFSIECVLFLWTLKINHPNTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMEAFDCLP 184

  Fly   227 LAALLNQQFLCIHGGLSPEIFTLDDIKTLNRFREPPAYGPMCDLLWSDPLEDFGNEKTNEFFSHN 291
            |||||||||||:||||||||..||||:.|:||:||||:||||||:|:||.||:|:|||.|.|:||
Zfish   185 LAALLNQQFLCVHGGLSPEINCLDDIRKLDRFKEPPAFGPMCDLIWADPGEDYGSEKTAEHFNHN 249

  Fly   292 SVRGCSYFFSYSACCEFLQKNNLLSIVRAHEAQDAGYRMYRKNQVTGFPSLITIFSAPNYLDVYN 356
            |||||||||||:|.|:||..|||||::|||||||||||||||:|.||||||||||||||||||||
Zfish   250 SVRGCSYFFSYAAVCDFLTNNNLLSVIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYN 314

  Fly   357 NKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTEMLVNILNICSDDELVAGP 421
            |||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||::..
Zfish   315 NKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTEMLVNVLNICSDDELMSEG 379

  Fly   422 DDELEEELRKKIVLVPANASNNNNNNNTPSKPASMSALRKEIIRNKIRAIGKMSRVFSILREESE 486
            ||..|                           ....|:|||:|||||||||||:||||:||||||
Zfish   380 DDLCE---------------------------GGAPAVRKEVIRNKIRAIGKMARVFSVLREESE 417

  Fly   487 SVLQLKGLTPTGALPVGALSGGRDSLK---------EALQGLTASSHIHSFAEAKGLDAVNERMP 542
            |||.||||||||.||:|.||||:.:|:         .|:||.:.:..|.:|.||:|||.:|||||
Zfish   418 SVLTLKGLTPTGTLPLGVLSGGKQTLQNATIEAKEGRAIQGFSPTRKIRNFEEARGLDRINERMP 482

  Fly   543 PRRPLLMSASSSSITTVTRSSSSSSNNNN 571
            ||:    .......|||..::..:..:.|
Zfish   483 PRK----DGQKPDGTTVNAANEKNGTDGN 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanA1NP_001247378.2 MPP_PP2B 81..385 CDD:277361 245/303 (81%)
PP2Ac 98..369 CDD:197547 221/270 (82%)
ppp3ccaXP_005171933.1 MPP_PP2B 39..343 CDD:277361 245/303 (81%)
PP2Ac 59..327 CDD:197547 220/267 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 82 1.000 Domainoid score I8352
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 1 1.010 - - D194337at33208
OrthoFinder 1 1.000 - - FOG0000983
OrthoInspector 1 1.000 - - mtm6407
orthoMCL 1 0.900 - - OOG6_100566
Panther 1 1.100 - - O PTHR45673
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X576
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.790

Return to query results.
Submit another query.