DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CanA1 and ppp2cab

DIOPT Version :9

Sequence 1:NP_001247378.2 Gene:CanA1 / 43670 FlyBaseID:FBgn0010015 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_957205.2 Gene:ppp2cab / 393885 ZFINID:ZDB-GENE-040426-877 Length:309 Species:Danio rerio


Alignment Length:286 Identity:118/286 - (41%)
Similarity:168/286 - (58%) Gaps:16/286 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 RIEEAVALRIITEGAALLREEKNMIDVEAPITVCGDIHGQFFDLVKLFEVGGPPATTRYLFLGDY 159
            ::.|.....:..:...:|.:|.|:.:|..|:|||||:||||.||::||.:||....|.|||:|||
Zfish    22 QLSETQVKTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDY 86

  Fly   160 VDRGYFSIECVLYLWSLKITYPTTLSLLRGNHECRHLTEYFTFKQECIIKY-SESIYDACMEAFD 223
            |||||:|:|.|..|.:||:.|...:::||||||.|.:|:.:.|..||:.|| :.:::....:.||
Zfish    87 VDRGYYSVETVSLLVALKVRYRERVTILRGNHESRQITQVYGFYDECLRKYGNANVWKFFTDLFD 151

  Fly   224 CLPLAALLNQQFLCIHGGLSPEIFTLDDIKTLNRFREPPAYGPMCDLLWSDPLEDFGNEKTNEFF 288
            .|||.||::.|..|:||||||.|.|||.|:.|:|.:|.|..||||||||||| :|.|....    
Zfish   152 YLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDP-DDRGGWGI---- 211

  Fly   289 SHNSVRGCSYFFSYSACCEFLQKNNLLSIVRAHEAQDAGYRMYRKNQVTGFPSLITIFSAPNYLD 353
               |.||..|.|.......|...|.|..:.|||:....||.......|      :||||||||..
Zfish   212 ---SPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNV------VTIFSAPNYCY 267

  Fly   354 VYNNKAAVLKYENNV-MNIRQFNCSP 378
            ...|:||:::.::.: .:..||:.:|
Zfish   268 RCGNQAAIMELDDTLKYSFLQFDPAP 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanA1NP_001247378.2 MPP_PP2B 81..385 CDD:277361 118/286 (41%)
PP2Ac 98..369 CDD:197547 115/272 (42%)
ppp2cabNP_957205.2 MPP_PP2A_PP4_PP6 9..293 CDD:277360 117/284 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.