DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CanA1 and ppp1cab

DIOPT Version :9

Sequence 1:NP_001247378.2 Gene:CanA1 / 43670 FlyBaseID:FBgn0010015 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_997875.1 Gene:ppp1cab / 327301 ZFINID:ZDB-GENE-030131-5512 Length:332 Species:Danio rerio


Alignment Length:309 Identity:108/309 - (34%)
Similarity:177/309 - (57%) Gaps:27/309 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 KTGKPNFDALRQHFL-LEG-------RIEEAVALRIITEGAALLREEKNMIDVEAPITVCGDIHG 133
            ::.|.|.|::.|..| ::|       ::.|.....:..:...:...:..::::|||:.:|||:||
Zfish     3 ESDKINIDSIIQRLLEVKGSRPGKNVQLTEQEIRGLCLKSREIFLSQPILLELEAPLKICGDVHG 67

  Fly   134 QFFDLVKLFEVGGPPATTRYLFLGDYVDRGYFSIECVLYLWSLKITYPTTLSLLRGNHECRHLTE 198
            |::||::|||.||.|..:.|||||||||||..|:|.:..|.:.||.||....||||||||..:..
Zfish    68 QYYDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINR 132

  Fly   199 YFTFKQECIIKYSESIYDACMEAFDCLPLAALLNQQFLCIHGGLSPEIFTLDDIKTLNRFREPPA 263
            .:.|..||..:|:..::....:.|:|||:||:::::..|.||||||::.:::.|:.:.|..:.|.
Zfish   133 IYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQIRRVMRPTDVPD 197

  Fly   264 YGPMCDLLWSDPLEDFGNEKTNEFFSHNSVRGCSYFFSYSACCEFLQKNNLLSIVRAHEAQDAGY 328
            .|.:|||||:||.:|......|:       ||.|:.|......:||.|:::..|.|||:..:.||
Zfish   198 QGLLCDLLWADPDKDVMGWGEND-------RGVSFTFGSDVVAKFLHKHDMDLICRAHQVVEDGY 255

  Fly   329 RMYRKNQVTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCS 377
            ..:.|.|      |:|:||||||...::|..|::..:..:|      ||
Zfish   256 EFFAKRQ------LVTLFSAPNYCGEFDNAGAMMSVDETLM------CS 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanA1NP_001247378.2 MPP_PP2B 81..385 CDD:277361 107/305 (35%)
PP2Ac 98..369 CDD:197547 99/270 (37%)
ppp1cabNP_997875.1 PTZ00480 6..321 CDD:185658 108/306 (35%)
MPP_PP1_PPKL 8..298 CDD:277359 107/304 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.