DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CanA1 and F44B9.9

DIOPT Version :10

Sequence 1:NP_524600.3 Gene:CanA1 / 43670 FlyBaseID:FBgn0010015 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001367454.1 Gene:F44B9.9 / 185726 WormBaseID:WBGene00018410 Length:254 Species:Caenorhabditis elegans


Alignment Length:359 Identity:91/359 - (25%)
Similarity:136/359 - (37%) Gaps:141/359 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 LLREEKNMIDVEAPITVCGDIHGQFFDLVKLFEVGGPP-----------ATTRYLFLGDYVDRGY 164
            |.::||.:.::..|:|:.|||||||.|||:|.......           :|.:::||||||||||
 Worm    19 LFKKEKTLAEISPPVTIVGDIHGQFEDLVRLLNTRNSSENAKSKPIYGFSTKKWVFLGDYVDRGY 83

  Fly   165 FSIECVLYLWSLKITYPTTLSLLRGNHECRHLTEYFTFKQECIIKYSESIYDACMEAFDCLPLAA 229
            .|::|:..::||||.:|....|||||||.|.:...:.|:                          
 Worm    84 KSLDCICLVFSLKICFPKQYILLRGNHETRAINFRYGFR-------------------------- 122

  Fly   230 LLNQQFLCIHGGLSPEIFTLDDIKTLNRFREPPAYGPMCDLLWSDPLEDFGNEKTNEFFSHNSVR 294
                  :|             .:..|....:|.                         |..|:.|
 Worm   123 ------VC-------------SVVVLKIPAKPS-------------------------FIRNNKR 143

  Fly   295 GCSYFFSYSACCEFLQKNNLLSIVRAHEAQDAGYRMYRKNQVTGFPSLITIFSAPNYLDVYNNKA 359
            |.|..|:.:|..|..:..|:..|||.|:...||::.:...:      |.||||||.|::..:|..
 Worm   144 GLSVCFNEAAVNETCRLLNISLIVRGHQMMPAGFKFFADRK------LCTIFSAPRYMNEIDNSG 202

  Fly   360 AVLKYENN------VMNIRQFNCSPHPYWLPNF-MDVFTWSLPFVGEKVTEMLVNILNICSDDEL 417
            ||:|..:|      :|.            .||| |.:|                 :|.:.|.:.|
 Worm   203 AVMKVASNGKISISIMK------------NPNFAMKMF-----------------LLQMKSHNSL 238

  Fly   418 VAGPDDELEEELRKKIVLVPANASNNNNNNNTPS 451
                 |.....|.|             |:||.||
 Worm   239 -----DHRNMRLSK-------------NSNNLPS 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanA1NP_524600.3 MPP_PP2B 81..385 CDD:277361 75/290 (26%)
F44B9.9NP_001367454.1 MPP_superfamily 4..219 CDD:472684 74/275 (27%)

Return to query results.
Submit another query.