DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CanA1 and R08C7.8

DIOPT Version :10

Sequence 1:NP_524600.3 Gene:CanA1 / 43670 FlyBaseID:FBgn0010015 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_500563.2 Gene:R08C7.8 / 177208 WormBaseID:WBGene00019951 Length:362 Species:Caenorhabditis elegans


Alignment Length:346 Identity:115/346 - (33%)
Similarity:159/346 - (45%) Gaps:42/346 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 IITEGAALLREEKNMIDVEAPITVCGDIHGQFFDLVKLFEVGGPPATTRYLFLGDYVDRGYFSIE 168
            |:.:..:.|:....|:.||.|||:.||||||...|::.|:..|.|...::||||||||||..|.|
 Worm    35 ILEKAESTLKPLPAMLQVEHPITIVGDIHGQLDALIRYFDAVGYPPKVQFLFLGDYVDRGAKSFE 99

  Fly   169 CVLYLWSLKITYPTTLSLLRGNHECRHLTEYFTFKQECIIKYSESIYDACMEAFDCLPLAALLNQ 233
            ..|.|:..||.||..:.||||||||..:...:.|.:|...|....::......|:.|||.|.:.|
 Worm   100 VSLLLFCYKIRYPHLVHLLRGNHECMKMNRLYGFYEELTRKRGGRMWRQYQNVFNELPLCARVGQ 164

  Fly   234 QFLCIHGGLSPEIFTLDDIKTLNRFREPPA--YGPMCDLLWSDPLEDFGNEKTNEFFSHNSVRGC 296
            :.||:|||:|....:.:..|.|.:...|..  .|...||:|:||.:|    |.|. |:.|..|..
 Worm   165 RILCMHGGISQNCNSWESFKALKKPNTPLTCDEGLQVDLMWADPTQD----KCNT-FAMNKQRAI 224

  Fly   297 SYFFSYSACCEFLQKNNLLSIVRAHEAQDAGYR-MYRKNQVTGFPSLITIFSAPNYLDVYNNKAA 360
            |..|......:||:|..|..||||||....|:. ::.|       ..:|:||||.|.....|..|
 Worm   225 SVVFGQKGLDDFLKKLGLSLIVRAHEVSQEGFNFLFNK-------KCVTVFSAPYYCGNDTNCGA 282

  Fly   361 VL----KYENNVMNIRQFNCSPHPYWLP-NFMDVFTWSLPFVGEKVTEMLVNILNICSDDELVAG 420
            ::    .||.:...:|     |.....| ||            |.|..|..|...:     :||.
 Worm   283 IMHVSDSYELSFTVLR-----PRMIATPENF------------EIVKLMENNYKGL-----MVAS 325

  Fly   421 PDDELEEELRKKIVLVPANAS 441
            ||......|:...|..|...|
 Worm   326 PDPNRGRHLQSADVPQPTPPS 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanA1NP_524600.3 MPP_PP2B 81..385 CDD:277361 101/288 (35%)
R08C7.8NP_500563.2 PP2Ac 27..299 CDD:197547 99/280 (35%)

Return to query results.
Submit another query.