DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CanA1 and ppp3ca

DIOPT Version :9

Sequence 1:NP_001247378.2 Gene:CanA1 / 43670 FlyBaseID:FBgn0010015 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_012811020.1 Gene:ppp3ca / 100144934 XenbaseID:XB-GENE-952299 Length:530 Species:Xenopus tropicalis


Alignment Length:547 Identity:378/547 - (69%)
Similarity:446/547 - (81%) Gaps:36/547 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 NKQKMQYTKTRERMVDDVPLPPTHKLTMSEVYDDPKTGKPNFDALRQHFLLEGRIEEAVALRIIT 106
            |:.|:   .|.:|.|..||.||:|:||..||:|:  .|||..|.|:.|.:.|||:||:|||||||
 Frog     7 NEAKL---STLDRAVKAVPFPPSHRLTAKEVFDN--DGKPRVDILKAHLMKEGRLEESVALRIIT 66

  Fly   107 EGAALLREEKNMIDVEAPITVCGDIHGQFFDLVKLFEVGGPPATTRYLFLGDYVDRGYFSIECVL 171
            |||::||:|||::|::||:|||||||||||||:|||||||.||.|||||||||||||||||||||
 Frog    67 EGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVL 131

  Fly   172 YLWSLKITYPTTLSLLRGNHECRHLTEYFTFKQECIIKYSESIYDACMEAFDCLPLAALLNQQFL 236
            |||:|||.||.||.|||||||||||||||||||||.|||||.:|||||:||||||||||:|||||
 Frog   132 YLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFL 196

  Fly   237 CIHGGLSPEIFTLDDIKTLNRFREPPAYGPMCDLLWSDPLEDFGNEKTNEFFSHNSVRGCSYFFS 301
            |:||||||||.|||||:.|:||:||||||||||:||||||||:||||:.|.|:||:|||||||:|
 Frog   197 CVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDYGNEKSQEHFTHNTVRGCSYFYS 261

  Fly   302 YSACCEFLQKNNLLSIVRAHEAQDAGYRMYRKNQVTGFPSLITIFSAPNYLDVYNNKAAVLKYEN 366
            |.|.|||||.||||||:|||||||||||||||:|.||||||||||||||||||||||||||||||
 Frog   262 YPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYEN 326

  Fly   367 NVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTEMLVNILNICSDDELVAGPDDELEEELRK 431
            |||||||||||||||||||||||||||||||||||||||||:|:||||||||: .:|..:::   
 Frog   327 NVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTEMLVNVLSICSDDELVS-EEDACDDQ--- 387

  Fly   432 KIVLVPANASNNNNNNNTPSKPASMSALRKEIIRNKIRAIGKMSRVFSILREESESVLQLKGLTP 496
               |:.|            .|..:.:|.|||:|||||||||||:||||:|||||||||.||||||
 Frog   388 ---LIYA------------QKKGATAAARKEVIRNKIRAIGKMARVFSVLREESESVLTLKGLTP 437

  Fly   497 TGALPVGALSGGRDSLK----------EALQGLTASSHIHSFAEAKGLDAVNERMPPRRPLLMSA 551
            ||.||.|.||||:.:|:          ||::|.:....|.||.||||||.:||||||||..:  .
 Frog   438 TGMLPSGVLSGGKQTLQSATIEAIEADEAIKGFSPQHKITSFEEAKGLDRINERMPPRRDAM--P 500

  Fly   552 SSSSITTVTRSSSSSSNNNNNNSNTSS 578
            |.:::.::.::.||.:|..::|.:.||
 Frog   501 SDANLNSINKAISSETNGTDSNGSNSS 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanA1NP_001247378.2 MPP_PP2B 81..385 CDD:277361 253/303 (83%)
PP2Ac 98..369 CDD:197547 229/270 (85%)
ppp3caXP_012811020.1 MPP_PP2B 41..345 CDD:277361 253/303 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 88 1.000 Domainoid score I7795
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D194337at33208
OrthoFinder 1 1.000 - - FOG0000983
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45673
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X576
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.110

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