DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanA1 and ppp4ca

DIOPT Version :9

Sequence 1:NP_001247378.2 Gene:CanA1 / 43670 FlyBaseID:FBgn0010015 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001103884.1 Gene:ppp4ca / 100003080 ZFINID:ZDB-GENE-030131-4433 Length:311 Species:Danio rerio


Alignment Length:287 Identity:119/287 - (41%)
Similarity:172/287 - (59%) Gaps:24/287 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 LEGRIEEAVALRIITEGAA---------LLREEKNMIDVEAPITVCGDIHGQFFDLVKLFEVGGP 147
            |:.:||:.....:|.|...         :|.||.|:..|::|:||||||||||:||.:||.|||.
Zfish    11 LDRQIEQLRRCELIKENEVKALCAKAREILVEESNVQSVDSPVTVCGDIHGQFYDLKELFRVGGE 75

  Fly   148 PATTRYLFLGDYVDRGYFSIECVLYLWSLKITYPTTLSLLRGNHECRHLTEYFTFKQECIIKY-S 211
            ...|.|||:||:||||::|:|..|.|.:||:.||..::|:|||||.|.:|:.:.|..||..|| |
Zfish    76 VPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFFDECHRKYGS 140

  Fly   212 ESIYDACMEAFDCLPLAALLNQQFLCIHGGLSPEIFTLDDIKTLNRFREPPAYGPMCDLLWSDPL 276
            .:::..|.|.||.|.|:|:::.:..|:||||||.|.|||.|:|::|.:|.|..|||||||||||.
Zfish   141 ATVWRYCTEIFDYLSLSAIVDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPE 205

  Fly   277 EDFGNEKTNEFFSHNSVRGCSYFFSYSACCEFLQKNNLLSIVRAHEAQDAGYRMYRKNQVTGFPS 341
            :..|        ...|.||..|.|......:|...|::..|.|||:....||:.:..:.|     
Zfish   206 DTTG--------WGVSPRGAGYLFGSDVVAQFNAANDISMICRAHQLVMEGYKWHFNDTV----- 257

  Fly   342 LITIFSAPNYLDVYNNKAAVLKYENNV 368
             :|::|||||.....|.||:|:.:.::
Zfish   258 -LTVWSAPNYCYRCGNVAAILELDEHL 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanA1NP_001247378.2 MPP_PP2B 81..385 CDD:277361 119/287 (41%)
PP2Ac 98..369 CDD:197547 116/281 (41%)
ppp4caNP_001103884.1 PTZ00239 10..311 CDD:173488 119/287 (41%)
MPP_PP2A_PP4_PP6 10..294 CDD:277360 119/287 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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