DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and htr2cl2

DIOPT Version :10

Sequence 1:NP_524599.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001429473.1 Gene:htr2cl2 / 798599 ZFINID:ZDB-GENE-120215-109 Length:348 Species:Danio rerio


Alignment Length:372 Identity:111/372 - (29%)
Similarity:180/372 - (48%) Gaps:61/372 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 SIVLLIVILGTVVGNVLVCIAVCMVRKLRRPCNYLLVSLALSDLCVALLVMPMAL---LYEVLEK 227
            ::.:|::|..|:.||:||.:||.:..||..|.|:.|.|||::|:.|..||||::|   ||.  ..
Zfish    24 ALFILVIIFFTIAGNILVIMAVSIESKLHNPTNFFLCSLAVADMLVGFLVMPISLISILYN--HT 86

  Fly   228 WNFGPLLCDIWVSFDVLCCTASILNLCAISVDRYLAITKPLEYGVKRTPRRMMLCVGIVWLAAAC 292
            |....|||.:|:..|||..||||::|||||:|||:.|..|......::.|:.|:.:..||..:..
Zfish    87 WPLPQLLCPLWIFLDVLFSTASIMHLCAISLDRYIGIRNPFSISHTQSSRKAMIKIITVWTISIV 151

  Fly   293 ISLPPLLILGNEHEDEEGQPICTVCQNFAYQIYATLGSFYIPLSVMLFVYYQIFRAARRIVLEEK 357
            :|| |:.::|.:.|.:.......|.....:.:..::.:|::||.:|:..||....          
Zfish   152 LSL-PIPVMGLQDEQKVFIDCACVLNEPRFILVGSIVAFFVPLVIMVVCYYLTLH---------- 205

  Fly   358 RAQTHLQQALNGTGSPSAPQAPPLGHTELASSGNGQRHSSVGNTSLTYSTCGGLSSGGGALAGHG 422
                |||:     .|.|.|.          .|.:...|||:..:..::     |:|        .
Zfish   206 ----HLQK-----HSKSFPH----------DSKSSCMHSSIETSDTSF-----LNS--------K 238

  Fly   423 SGGGVSGSTGLLGSP--HHKKLRFQLAKEKKASTTLGIIMSAFTVCWLPFFILALIRPF------ 479
            |...:|....:..||  ..:.:...|..|::||..|||:...|.:.|.||||..::...      
Zfish   239 SSSKMSAFPVIKRSPLKSRQGMNRALENERRASKVLGIVFFLFLIMWCPFFITNVLNAICRDNCS 303

  Fly   480 ETMHVPASLSSLFLWLGYANSLLNPIIYATLNRDFRKPFQEILYFRC 526
            |.:|   .|..:|:|:||.:|.:||:||...|:.:|:.|..  |.||
Zfish   304 EYVH---KLLDIFVWVGYVSSGVNPLIYTLFNKTYRQAFAR--YLRC 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_524599.1 7tmA_5-HT7 163..518 CDD:320452 107/362 (30%)
TM helix 1 164..190 CDD:320452 9/23 (39%)
TM helix 2 197..223 CDD:320452 13/28 (46%)
TM helix 3 235..265 CDD:320452 17/29 (59%)
TM helix 4 277..299 CDD:320452 7/21 (33%)
TM helix 5 319..348 CDD:320452 6/28 (21%)
TM helix 6 447..477 CDD:320452 12/29 (41%)
TM helix 7 486..511 CDD:320452 10/24 (42%)
htr2cl2NP_001429473.1 None

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