DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and adra1aa

DIOPT Version :10

Sequence 1:NP_524599.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001311383.1 Gene:adra1aa / 798498 ZFINID:ZDB-GENE-030131-2831 Length:485 Species:Danio rerio


Alignment Length:439 Identity:138/439 - (31%)
Similarity:212/439 - (48%) Gaps:85/439 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 LVPLSD--TPLLLEEFA-----AGEFVLPPLT---SIFVSIVLLIVILGTVVGNVLVCIAVCMVR 191
            :||..|  ||   |.|.     ..:.::|.|.   ::.:.:||.|.|:..|:||:||.::|...|
Zfish     8 MVPFKDNMTP---ESFPENCSNCSQVLVPELNVMKAVALGVVLAIFIVFGVLGNILVILSVACHR 69

  Fly   192 KLRRPCNYLLVSLALSDLCVALLVMPMALLYEVLEKWNFGPLLCDIWVSFDVLCCTASILNLCAI 256
            .||...:|.:|:||::||.::..|:|.:.::|:|.:|.||...||:|.:.|||||||||::||.|
Zfish    70 NLRTVTHYFIVNLAVADLLLSSTVLPFSTVFEMLGRWIFGRPFCDVWAAMDVLCCTASIMSLCVI 134

  Fly   257 SVDRYLAITKPLEYGVKRTPRRMMLCVGIVWLAAACISLPPLLILGNEHEDEEGQPICTVCQNFA 321
            |||||:.::.||:|....|.||.:|.:..:|:.:..||:.||  .|.:....:.:.||.:.:...
Zfish   135 SVDRYIGVSYPLQYPSIVTERRALLALIALWVLSITISIGPL--FGWKEPAPDDESICKITEEPG 197

  Fly   322 YQIYATLGSFYIPLSVMLFVYYQIFRAARRIVLEEKRAQTHLQQALNGTGSPSAPQAPPLGHTEL 386
            |.|::.|||||:||.|:|.:|.:::..|||    |.|            |..|..:.....|.|.
Zfish   198 YAIFSALGSFYLPLVVILSMYCRVYVVARR----ETR------------GLISGQKTEKSDHAET 246

  Fly   387 ASSGNGQRHSSVGNTSLTYSTCGGLSSGGGALAGHGSGGGVSGSTGLLGSPHHKKLRFQLAKEKK 451
            .:                             |..|.....||....|....|......:.::|||
Zfish   247 VT-----------------------------LRIHRGNMTVSEDEALRNRTHFALRLLKFSREKK 282

  Fly   452 ASTTLGIIMSAFTVCWLPFFILALI-------RPFETMHVPASLSSLFLWLGYANSLLNPIIYAT 509
            |:.||||::..|.:||||||::..|       ||.:|:.      .:..||||.||.:|||||..
Zfish   283 AAKTLGIVVGCFVLCWLPFFLVLPIGSIFPTYRPSDTVF------KITFWLGYFNSCINPIIYPC 341

  Fly   510 LNRDFRKPFQEILYFRCSSLNTMMRENYYQDQYGEPPSQRVMLGDERHG 558
            .:::|:|.|..:|..||....:......||..            ..|||
Zfish   342 SSQEFKKAFLSVLGARCLRKRSTPSHTLYQSH------------SPRHG 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_524599.1 7tmA_5-HT7 163..518 CDD:320452 120/361 (33%)
TM helix 1 164..190 CDD:320452 10/25 (40%)
TM helix 2 197..223 CDD:320452 8/25 (32%)
TM helix 3 235..265 CDD:320452 20/29 (69%)
TM helix 4 277..299 CDD:320452 7/21 (33%)
TM helix 5 319..348 CDD:320452 12/28 (43%)
TM helix 6 447..477 CDD:320452 16/36 (44%)
TM helix 7 486..511 CDD:320452 11/24 (46%)
adra1aaNP_001311383.1 7tm_GPCRs 41..350 CDD:475119 120/361 (33%)
TM helix 1 43..67 CDD:410628 10/23 (43%)
TM helix 2 76..98 CDD:410628 8/21 (38%)
TM helix 3 114..136 CDD:410628 14/21 (67%)
TM helix 4 159..175 CDD:410628 4/15 (27%)
TM helix 5 196..219 CDD:410628 11/22 (50%)
TM helix 6 284..306 CDD:410628 11/21 (52%)
TM helix 7 318..343 CDD:410628 12/30 (40%)

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