DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and drd1b

DIOPT Version :10

Sequence 1:NP_524599.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001129448.1 Gene:drd1b / 568126 ZFINID:ZDB-GENE-070524-2 Length:446 Species:Danio rerio


Alignment Length:384 Identity:132/384 - (34%)
Similarity:186/384 - (48%) Gaps:86/384 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 LTSIFVSIVLLIVILGTVVGNVLVCIAVCMVRKLR-RPCNYLLVSLALSDLCVALLVMPMALLYE 223
            ||..|:|    ::||.|::||.|||.||...|.|| :..|:.::|||:|||.||:||||.....|
Zfish    23 LTGCFLS----LLILTTLLGNTLVCAAVTKFRHLRSKVTNFFVISLAISDLLVAILVMPWKAATE 83

  Fly   224 VLEKWNFGPLLCDIWVSFDVLCCTASILNLCAISVDRYLAITKPLEYGVKRTPRRMMLCVGIVWL 288
            ::..|.|| ..||:||:||::|.||||||||.||||||.||:.|..|..|.||:...:.:.:.|.
Zfish    84 IVGFWPFG-AFCDVWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKVAFIMISVAWT 147

  Fly   289 AAACISLPPLLILGNEHEDE------------EGQP-ICTVCQNFAYQIYATLGSFYIPLSVMLF 340
            .:..||..|:.:  |.|:.:            |..| .|....|..|.|.::|.|||||:::||.
Zfish   148 LSILISFIPVQL--NWHKAQTTSYTELNGTYGELPPDNCDSSLNRTYAISSSLISFYIPVAIMLV 210

  Fly   341 VYYQIFRAARRIVLEEKRAQTHLQQALNGTGSPSAPQAPPLGHTELASSGNGQRHSSVGNTSLTY 405
            .|.:|:|.|::                         |...:...|.|:.....||||:||.:...
Zfish   211 TYTRIYRIAQK-------------------------QIRRISALERAAESAKNRHSSMGNNASME 250

  Fly   406 STCGGLSSGGGALAGHGSGGGVSGSTGLLGSPHHKKLRFQLAKEKKASTTLGIIMSAFTVCWLPF 470
            |                                ....:....:|.|...||.:||..|..|||||
Zfish   251 S--------------------------------ESSFKMSFKRETKVLKTLSVIMGVFVCCWLPF 283

  Fly   471 FILALIRPF-------ETMHVPASLSSLFLWLGYANSLLNPIIYATLNRDFRKPFQEIL 522
            |:|..:.||       :.:.:.::...:|:|.|:|||.||||||| .|.||||.|..:|
Zfish   284 FVLNCMVPFCNPNESTDFLCISSTTFDVFVWFGWANSSLNPIIYA-FNADFRKAFSILL 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_524599.1 7tmA_5-HT7 163..518 CDD:320452 128/375 (34%)
TM helix 1 164..190 CDD:320452 12/25 (48%)
TM helix 2 197..223 CDD:320452 13/25 (52%)
TM helix 3 235..265 CDD:320452 22/29 (76%)
TM helix 4 277..299 CDD:320452 4/21 (19%)
TM helix 5 319..348 CDD:320452 13/28 (46%)
TM helix 6 447..477 CDD:320452 14/29 (48%)
TM helix 7 486..511 CDD:320452 13/24 (54%)
drd1bNP_001129448.1 7tm_GPCRs 21..337 CDD:475119 130/378 (34%)
TM helix 1 24..48 CDD:320443 13/27 (48%)
TM helix 2 58..80 CDD:320443 13/21 (62%)
TM helix 3 95..117 CDD:320443 15/21 (71%)
TM helix 4 140..156 CDD:320443 3/15 (20%)
TM helix 5 190..213 CDD:320443 10/22 (45%)
TM helix 6 266..288 CDD:320443 12/21 (57%)
TM helix 7 306..331 CDD:320443 13/25 (52%)

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