DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and LOC567498

DIOPT Version :10

Sequence 1:NP_524599.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001430360.1 Gene:LOC567498 / 567498 -ID:- Length:398 Species:Danio rerio


Alignment Length:378 Identity:127/378 - (33%)
Similarity:181/378 - (47%) Gaps:84/378 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 PLTSIFVSIVLLIVILGTVVGNVLVCIAVCMVRKLR-RPCNYLLVSLALSDLCVALLVMPMALLY 222
            |...:|:...|.:::|.|::||.:||.||...|.|| :..|..:||||:|||.||:||||.....
Zfish    18 PAGRVFLGCALSLLVLWTLLGNFMVCAAVLRFRHLRGKVTNVFIVSLAMSDLLVAVLVMPWKAAT 82

  Fly   223 EVLEKWNFGPLLCDIWVSFDVLCCTASILNLCAISVDRYLAITKPLEYGVKRTPRRMMLCVGIVW 287
            ||...|.||. .|:.||:||::|.||||||||.||:|||.||:.|.:|..|...|..::.|.:.|
Zfish    83 EVTGHWAFGS-FCECWVAFDIMCSTASILNLCVISLDRYWAISDPFQYERKMNRRVALVMVSVTW 146

  Fly   288 LAAACISLPPLLILGNEHEDE---------EGQPICTVCQNFAYQIYATLGSFYIPLSVMLFVYY 343
            :.:..||..|:.:  |.|..:         ..:.:|....:..|.|.::|.|||||::|||..|.
Zfish   147 IVSVAISFVPVQL--NWHRADLDTVNTSNWTTKEMCDSSLSRTYAISSSLISFYIPVAVMLVTYT 209

  Fly   344 QIFRAARRIVLEEKRAQTHLQQALNGTGSPSAPQAPPLGHTELASSGNGQRHSSVGNTSLTYSTC 408
            :|:|.|:..:    ::.:.|::|.....|.||                |.|            ||
Zfish   210 RIYRIAQIQI----KSISSLERAAERAQSCSA----------------GAR------------TC 242

  Fly   409 GGLSSGGGALAGHGSGGGVSGSTGLLGSPHHKKLRFQLAKEKKASTTLGIIMSAFTVCWLPFFIL 473
                                            .|:.:..:|.|...||.:||..|..||.|||:|
Zfish   243 --------------------------------PLQHRAIRETKLFKTLSVIMGVFVCCWFPFFVL 275

  Fly   474 ALIRPFETMHVPASLS----SLFLWLGYANSLLNPIIYATLNRDFRKPFQEIL 522
            ....||  .|.|..:|    ::|:|.|:.||.||||||| .|.|||..|..:|
Zfish   276 NCAVPF--CHKPDCVSEATFNVFVWFGWCNSSLNPIIYA-FNSDFRDAFARLL 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_524599.1 7tmA_5-HT7 163..518 CDD:320452 124/368 (34%)
TM helix 1 164..190 CDD:320452 10/25 (40%)
TM helix 2 197..223 CDD:320452 14/25 (56%)
TM helix 3 235..265 CDD:320452 20/29 (69%)
TM helix 4 277..299 CDD:320452 6/21 (29%)
TM helix 5 319..348 CDD:320452 13/28 (46%)
TM helix 6 447..477 CDD:320452 13/29 (45%)
TM helix 7 486..511 CDD:320452 13/28 (46%)
LOC567498NP_001430360.1 None

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