DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and htr7b

DIOPT Version :9

Sequence 1:NP_001263131.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_021329876.1 Gene:htr7b / 565304 ZFINID:ZDB-GENE-091118-105 Length:404 Species:Danio rerio


Alignment Length:423 Identity:160/423 - (37%)
Similarity:225/423 - (53%) Gaps:69/423 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 PIAIVSYQGITSSNLGDSNTTLVPLSDTPLLLEEFAAGEFVLPPLT-SIFVSIVLLIVILGTVVG 179
            |.|:.:.:..::.:.|:..|                    :.|.|| ::.|.::|..:...||:|
Zfish    29 PTALTTAEPRSNGSCGEQRT--------------------LDPDLTKTVIVGLMLSSITAVTVMG 73

  Fly   180 NVLVCIAVCMVRKLRRPCNYLLVSLALSDLCVALLVMPMALLYEVL-EKWNFGPLLCDIWVSFDV 243
            |.||.||||:|:|||:|.||||||||::||.||:.|||.|::.::. ..|.||.:.|:|::..||
Zfish    74 NTLVVIAVCVVKKLRQPSNYLLVSLAIADLSVAVAVMPFAIVTDLTGGVWLFGEVFCNIFIGMDV 138

  Fly   244 LCCTASILNLCAISVDRYLAITKPLEYGVKRTPRRMMLCVGIVWLAAACISLPPLLILGNEHE-D 307
            :||||||:.||.|||||||.||:||.|..::..:.|...:..|||.:|.|:|||  ..|..|. :
Zfish   139 MCCTASIMTLCVISVDRYLGITRPLTYPARQNGQLMAKMIVGVWLVSASITLPP--FCGWAHNVN 201

  Fly   308 EEGQPICTVCQNFAYQIYATLGSFYIPLSVMLFVYYQIFRAARRIVLEEKRAQTHLQQALNGTGS 372
            ..|  :|.:.|:..|.:|:|..:||||:.||||:||:||:||||      ....|     |.|..
Zfish   202 TAG--VCLISQDVGYTLYSTAVAFYIPMVVMLFMYYKIFKAARR------SGAKH-----NFTSL 253

  Fly   373 PSAPQAPPLGHTELASSGNGQRHS-SVGNTSLTYSTCGGLSSGGGALAGHGSGGGVSGSTGLLGS 436
            |....|.|  ...||:......|. ..|.||..:||   ||.                   ||..
Zfish   254 PPIQLACP--EPALATVDGFCMHGMKNGATSEEFST---LSC-------------------LLNR 294

  Fly   437 PHHKKLRFQLAKEKKASTTLGIIMSAFTVCWLPFFILALIRPF----ETMHVPASLSSLFLWLGY 497
            .......|:  :|:||:||||:||..|:.||||||:....|||    .....|..|..:.|||||
Zfish   295 ERRSASIFR--REQKAATTLGVIMGVFSFCWLPFFLFTTARPFICGLLCNCAPVWLERVLLWLGY 357

  Fly   498 ANSLLNPIIYATLNRDFRKPFQEILYFRCSSLN 530
            .|||:||.|||..|||.|..::::|..|..::|
Zfish   358 TNSLMNPFIYAFFNRDLRSTYKDLLRCRYRNIN 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_001263131.1 7tm_4 173..>342 CDD:304433 83/170 (49%)
7tm_1 179..507 CDD:278431 139/334 (42%)
htr7bXP_021329876.1 7tmA_5-HT7 57..378 CDD:320452 150/361 (42%)
TM helix 1 58..84 CDD:320452 12/25 (48%)
TM helix 2 91..117 CDD:320452 16/25 (64%)
TM helix 3 130..160 CDD:320452 19/29 (66%)
TM helix 4 172..194 CDD:320452 9/23 (39%)
TM helix 5 211..240 CDD:320452 15/28 (54%)
TM helix 6 303..333 CDD:320452 16/31 (52%)
TM helix 7 346..371 CDD:320452 14/24 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595734
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1327781at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_106732
Panther 1 1.100 - - O PTHR24247
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1464
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.940

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