DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and htr1d

DIOPT Version :9

Sequence 1:NP_001263131.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001139158.1 Gene:htr1d / 556429 ZFINID:ZDB-GENE-090409-3 Length:386 Species:Danio rerio


Alignment Length:410 Identity:154/410 - (37%)
Similarity:220/410 - (53%) Gaps:58/410 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 SNTTLVPLSDTPLLLEEFAAGEFVLPPLTSIFVSIVLLIVILGTVVGNVLVCIAVCMVRKLRRPC 197
            |.|||....|..||             ...|.:|.:|.||.|.|.:.|..|...:.:.|||..|.
Zfish    18 SPTTLESWDDATLL-------------SLQISISAMLAIVTLATALSNAFVIATIFLTRKLHTPA 69

  Fly   198 NYLLVSLALSDLCVALLVMPMALLYEVLEKWNFGPLLCDIWVSFDVLCCTASILNLCAISVDRYL 262
            |:|:.|||.:||.|::||||::::|.|.:.|..|.::||||:|.|:..||||||:||.|::|||.
Zfish    70 NFLIGSLAATDLLVSILVMPISIVYTVSKTWTLGQIVCDIWLSSDITFCTASILHLCVIALDRYW 134

  Fly   263 AITKPLEYGVKRTPRRMMLCVGIVWLAAACISLPPLL-ILGNEHEDEEGQPICTVC----QNFAY 322
            |||..|||..:||.||..|.:.|||:.:..||||||. .....||:      .|.|    ...:|
Zfish   135 AITDALEYSKRRTMRRAALMIVIVWVISVSISLPPLFWRQAKAHEE------LTECMVNTDQISY 193

  Fly   323 QIYATLGSFYIPLSVMLFVYYQIFRAARRIVLEEKRAQTHLQQALNGTGSPSAPQAPPLGHTELA 387
            .:|:|.|:||:|..:::.:|.:|:.|||..:.:        ..|.:|....:|         :|.
Zfish   194 TLYSTFGAFYVPTVLLMILYGRIYVAARSRIFK--------TPATSGKRFTAA---------QLI 241

  Fly   388 SSGNGQRHSSVGNTSLTYSTCGGLSSGGGALAGHGSGGGVSGSTGLLGSPHHKKL--------RF 444
            .:..|....|:.:||   :..|.|::|||  .|.|.|||..|.:.|..:....||        |.
Zfish   242 QNSAGSSLCSLNSTS---NQEGHLNAGGG--GGSGGGGGGGGGSPLFTNSVKVKLADSVLERKRL 301

  Fly   445 QLAKEKKASTTLGIIMSAFTVCWLPFFILALIRPF--ETMHVPASLSSLFLWLGYANSLLNPIIY 507
            ..|:||||:.|||||:.||.|||||||:..|:...  :..:.|. |..:|.||||.|||:||:||
Zfish   302 CAAREKKATKTLGIILGAFIVCWLPFFVFTLVMGVCKDCWYHPV-LFDVFTWLGYLNSLINPVIY 365

  Fly   508 ATLNRDFRKPFQEILYF-RC 526
            ...|.||::.|.:::.| ||
Zfish   366 TAFNDDFKQAFHKLIKFKRC 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_001263131.1 7tm_4 173..>342 CDD:304433 73/173 (42%)
7tm_1 179..507 CDD:278431 131/342 (38%)
htr1dNP_001139158.1 7tm_1 52..365 CDD:278431 131/341 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm24861
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3253
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.940

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