DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and adra1bb

DIOPT Version :10

Sequence 1:NP_524599.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001007359.1 Gene:adra1bb / 492486 ZFINID:ZDB-GENE-041114-51 Length:481 Species:Danio rerio


Alignment Length:399 Identity:134/399 - (33%)
Similarity:200/399 - (50%) Gaps:88/399 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 PLLLEEFAAGEFVLPPLTSIFVSIVLLIVILGTVVGNVLVCIAVCMVRKLRRPCNYLLVSLALSD 208
            ||||..            ::.:.:||...|...:.||:||.::|...|.||.|.||.:|:||::|
Zfish    41 PLLLSR------------AVPLGLVLGFFITFAIAGNILVILSVVCNRHLRSPTNYFIVNLAIAD 93

  Fly   209 LCVALLVMPMALLYEVLEKWNFGPLLCDIWVSFDVLCCTASILNLCAISVDRYLAITKPLEYGVK 273
            |.:...|:|::...||:..|.||.:.||:|.:.|||||||||::||.||:|||:.::.||:|...
Zfish    94 LLLGTTVLPVSATLEVVGHWVFGRIFCDVWAAVDVLCCTASIMSLCVISIDRYIGVSHPLQYPNI 158

  Fly   274 RTPRRMMLCVGIVWLAAACISLPPLLILGNEHEDEEGQPICTVCQNFAYQIYATLGSFYIPLSVM 338
            .|.||.:|.:..||:.:..||:.||  ||.:........:|.:.:...|.::::||||||||.|:
Zfish   159 VTGRRALLAMLGVWVLSLVISIGPL--LGWKEPPSPDDTVCAINEEPFYALFSSLGSFYIPLIVI 221

  Fly   339 LFVYYQIFRAARRIVLEEKRAQTHLQQALNGTGSPSAPQAPPLGHTELASSG--------NGQRH 395
            |.:|.:::..|       ||...:|:..:.               ||..:||        ..|.|
Zfish   222 LVMYCRVYVVA-------KRTTKNLEAGVK---------------TESMNSGEITLRIHRGSQVH 264

  Fly   396 SSVGNT-------SLTYSTCGGLSSGGGALAGHGSGGGVSGSTGLLGSPHHKKLRFQLAKEKKAS 453
            ...|.:       |||.                                  |.|:|  ::||||:
Zfish   265 EDAGKSRAHQARNSLTV----------------------------------KLLKF--SREKKAA 293

  Fly   454 TTLGIIMSAFTVCWLPFFILALIRPFET-MHVPASLSSLFLWLGYANSLLNPIIYATLNRDFRKP 517
            .|||:::..||:||||||:...|..|.| :..|.::||:..||||.||.||||||...:|:|:..
Zfish   294 KTLGVVVGMFTLCWLPFFLTLPIVSFNTSLRPPETVSSIIFWLGYFNSCLNPIIYPCYSREFKLA 358

  Fly   518 FQEILYFRC 526
            |..||..||
Zfish   359 FIRILKCRC 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_524599.1 7tmA_5-HT7 163..518 CDD:320452 125/370 (34%)
TM helix 1 164..190 CDD:320452 8/25 (32%)
TM helix 2 197..223 CDD:320452 9/25 (36%)
TM helix 3 235..265 CDD:320452 19/29 (66%)
TM helix 4 277..299 CDD:320452 8/21 (38%)
TM helix 5 319..348 CDD:320452 12/28 (43%)
TM helix 6 447..477 CDD:320452 15/29 (52%)
TM helix 7 486..511 CDD:320452 14/24 (58%)
adra1bbNP_001007359.1 7tm_GPCRs 48..359 CDD:475119 125/370 (34%)
TM helix 1 50..74 CDD:410628 8/23 (35%)
TM helix 2 83..105 CDD:410628 9/21 (43%)
TM helix 3 121..143 CDD:410628 14/21 (67%)
TM helix 4 166..182 CDD:410628 5/15 (33%)
TM helix 5 203..226 CDD:410628 11/22 (50%)
TM helix 6 293..315 CDD:410628 11/21 (52%)
TM helix 7 327..352 CDD:410628 14/24 (58%)

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