DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 5-HT7 and Oamb

DIOPT Version :9

Sequence 1:NP_001263131.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster


Alignment Length:585 Identity:157/585 - (26%)
Similarity:222/585 - (37%) Gaps:233/585 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 LTSIFVSIVLLIVILGTVVGNVLVCIAVCMVRKLRRPCNYLLVSLALSDLCVALLVMPMALLYEV 224
            |.|:.|...:.::::|   ||.||..||....|||...|:.:|:||::||.|.|.|:|.:..:||
  Fly    21 LISLAVLEFINVLVIG---GNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFSATWEV 82

  Fly   225 LEKWNFGPLLCDIWVSFDVLCCTASILNLCAISVDRYLAITKPLEY-GVKRTPRRMMLCVGIVWL 288
            .:.|.||.|.|.||::.||..||||||||||||:|||:|:|:|:.| .:..|.:...|..|| |:
  Fly    83 FKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGI-WV 146

  Fly   289 AAACISLPPLL-------IL------GNE--------HEDEEGQ--------------------- 311
            .:..|..|||:       ::      ||.        ...|:||                     
  Fly   147 LSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSPPHI 211

  Fly   312 --------------PI------------------------------------------------- 313
                          ||                                                 
  Fly   212 GNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQNRP 276

  Fly   314 ----------CTVCQNFAYQIYATLGSFYIPLSVMLFVYYQIFRAARRIV--------------- 353
                      |.:..:..|.:|:.|||||||:.||||.|::|:|||.|..               
  Fly   277 QTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTKGSKG 341

  Fly   354 ----LEEKRAQTHLQQALNGTGSPSAPQAPPLGHTELASSGNG---------------QRHSSVG 399
                .||:|....:.:   |.||.........|.|:..::..|               ..|..: 
  Fly   342 IGSRFEEQRLTLRIHR---GRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLHHHDKI- 402

  Fly   400 NTSLTYSTCGGLSSGGGALAGHGSGG-----------------------------------GVSG 429
            ..|::|.:...:|.    |||||..|                                   ||:.
  Fly   403 KISVSYPSSENISE----LAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVAS 463

  Fly   430 STGLL-------------------GSPH----HKKL----------RFQLAKEKKASTTLGIIMS 461
            |..|.                   ||.|    :||:          ||::  |.||:.||.||:.
  Fly   464 SCYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRM--ETKAAKTLAIIVG 526

  Fly   462 AFTVCWLPFFILALIRPFETMHVPASLSSLFLWLGYANSLLNPIIYATLNRDFRKPFQEILYFRC 526
            .|..||.|||.:.:||||....|...|.|:..||||.||.:||:|||..::|||..|:.|: .||
  Fly   527 MFIFCWCPFFTMYIIRPFCQDCVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRII-CRC 590

  Fly   527  526
              Fly   591  590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_001263131.1 7tm_4 173..>342 CDD:304433 80/284 (28%)
7tm_1 179..507 CDD:278431 143/545 (26%)
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 56/128 (44%)
7tm_1 37..>181 CDD:278431 60/144 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.