DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and 5-HT2B

DIOPT Version :9

Sequence 1:NP_001263131.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001262373.1 Gene:5-HT2B / 41017 FlyBaseID:FBgn0261929 Length:947 Species:Drosophila melanogaster


Alignment Length:824 Identity:157/824 - (19%)
Similarity:226/824 - (27%) Gaps:465/824 - (56%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 SIVLLIVILGTVVGNVLVCIAVCMVRKLRRPCNYLLVSLALSDLCVALLVMPMALLYEVLEKWNF 230
            :::.|:::|||..||:|||:|:...|:|:...||.|:|||::||.||:||||:.:|..|...:..
  Fly    77 ALLALVLVLGTAAGNILVCLAIAWERRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVKGYFPL 141

  Fly   231 GPLLCDIWVSFDVLCCTASILNLCAISVDRYLAITKPLEYGVKRTPRRMMLCVGIVWLAAACISL 295
            |...|..|:..|||.|||||::||.|||||||::..|:.:|..:|.||:.|.:..|||.:..:||
  Fly   142 GSEHCLTWICLDVLFCTASIMHLCTISVDRYLSLRYPMRFGRNKTRRRVTLKIVFVWLLSIAMSL 206

  Fly   296 PPLLILGNEHEDEEGQPICTVCQNFAYQIYATLGSFYIPLSVMLFVYYQIFR------------- 347
            |..|:....|........|.: .:..|::..::..|||||.|||..|....|             
  Fly   207 PLSLMYSKNHASVLVNGTCQI-PDPVYKLVGSIVCFYIPLGVMLLTYCLTVRLLARQRQNLGGGQ 270

  Fly   348 ---AA---------------------RRI----------VLEEKRA------------------- 359
               ||                     ||:          ||....|                   
  Fly   271 QTAAATPGWASGWLGQAPALERRCTWRRLLKPGPGNASSVLHAHSANSTDTDLSTLDNHELWLPD 335

  Fly   360 ----------QTHLQQ----------------ALNGTGS----------------PSAP------ 376
                      .|.|.|                :.:.|||                ||:|      
  Fly   336 SSIKEPTPTTMTALHQFGAEMLKLSRGLESVASSSTTGSPTKSEFSLSNHLQLQYPSSPQRYAAT 400

  Fly   377 -------------------QAPPLG---------------------HTELASSGNG--------- 392
                               ||.|.|                     ...||||..|         
  Fly   401 HQQSHHHNHQQHPAGVYHQQASPKGRHGTTVLGLSTTTLGIERESTRNSLASSRMGGEQSDGTLS 465

  Fly   393 ---------------------------------------------QRHSSV-------------- 398
                                                         :||:|:              
  Fly   466 QLSQRLRAYKKRRRASSAVPGREKRAGHEDADEDVETPTSTLRRHKRHNSLPKNALYPRHTTVQE 530

  Fly   399 ----------------------------------------------------------------- 398
                                                                             
  Fly   531 SLDDDDDEEEESAQQKDQQTKSKICHSDTELDPPQKAKQCHIAGQNHQSDYLQLPSVCTCPYFGD 595

  Fly   399 ------------------------------------------GN-TSLTYSTCGGLSSG------ 414
                                                      || .|||.|...|::.|      
  Fly   596 RPLQNCVKSAEVKIISSAFRVTTTTTAVSSSPSEMELLMCSSGNKKSLTSSVSAGITGGPAGAAP 660

  Fly   415 ---GGALAGH--------------GSG-------------------------------------- 424
               |..|:.|              |||                                      
  Fly   661 ATVGSTLSPHSAHNQGSSLTVQSDGSGYLAAPGTPCPGRRKLSISKTASVVTWDSSRHRRRGSSF 725

  Fly   425 GGVSGSTGLLGSP--------------------HHKKLRFQ------------------------ 445
            |||  .|.||.:|                    .|:.:.:|                        
  Fly   726 GGV--RTSLLLTPTKTATTSNSSTPLRRSATLRSHQNMNYQGAGECGGKTRTTTSSPCMLQRQQT 788

  Fly   446 ----------------------LAKEKKASTTLGIIMSAFTVCWLPFFILALIRPFETMHVPASL 488
                                  :..|:||:..||::...|.:.|.|||:|.|: |.........:
  Fly   789 VRSHHSRNSSVISRNSSRHGRIIRLEQKATKVLGVVFFTFVILWSPFFVLNLL-PTVCAECEERI 852

  Fly   489 S----SLFLWLGYANSLLNPIIYATLNRDFRKPFQEILYFRCSS 528
            |    .:..|||||:|::|||.|...|:.||:.|:::|..|.||
  Fly   853 SHWVFDVVTWLGYASSMVNPIFYTIFNKVFRQAFKKVLLCRYSS 896

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_001263131.1 7tm_4 173..>342 CDD:304433 71/168 (42%)
7tm_1 179..507 CDD:278431 144/788 (18%)
5-HT2BNP_001262373.1 7tm_1 90..>262 CDD:278431 70/172 (41%)
7tm_4 90..>238 CDD:304433 60/148 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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