DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and 5-HT1B

DIOPT Version :9

Sequence 1:NP_001263131.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001137708.2 Gene:5-HT1B / 37191 FlyBaseID:FBgn0263116 Length:629 Species:Drosophila melanogaster


Alignment Length:675 Identity:199/675 - (29%)
Similarity:282/675 - (41%) Gaps:233/675 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 AYAAGKATVPAPLVEGETESATSQDFNSSSAFLGAIASASSTGSGSGSGSGSGSGSGSGSYGLAS 111
            |.|||...|||.::|.|..:....:    |.|:                               .
  Fly     8 AMAAGDDDVPASILEIELPAILLNE----SLFI-------------------------------E 37

  Fly   112 MNSSPIAIVSYQGITSSNL----------GDSNTTLVPLSDTPLLLEEFAAGEFVLPPLTSIFVS 166
            :|.:...:|.    |:|||          |:.|:....|.|..   :|.||.||.| .:..|.::
  Fly    38 LNGNLTQLVD----TTSNLSQIVWNRSINGNGNSNTFDLVDDE---QERAAVEFWL-LVKMIAMA 94

  Fly   167 IVLLIVILGTVVGNVLVCIAVCMVRKLRRPCNYLLVSLALSDLCVALLVMPMALLYEVLEKWNFG 231
            :||.::||.|::|||.|..|:.:.|.|:...|||:.|||::||.||.||||:..:||:...|..|
  Fly    95 VVLGLMILVTIIGNVFVIAAIILERNLQNVANYLVASLAVADLFVACLVMPLGAVYEISNGWILG 159

  Fly   232 PLLCDIWVSFDVLCCTASILNLCAISVDRYLAITKPLEYGVKRTPRRMMLCVGIVWLAAACISLP 296
            |.|||||.|.||||||||||:|.||:.|||..:|. ::|...|||||:.|.:..||.||..:||.
  Fly   160 PELCDIWTSCDVLCCTASILHLVAIAADRYWTVTN-IDYNNLRTPRRVFLMIFCVWFAALIVSLA 223

  Fly   297 PLLILGNEHED-----EEGQPICTVCQNFAYQIYATLGSFYIPLSVMLFVYYQIFRAARRIVLEE 356
            |.  .|.:..|     ||..  |.|.|:..|||:||..:||:||.|:||:|::|:..||:.:  :
  Fly   224 PQ--FGWKDPDYMKRIEEQH--CMVSQDVGYQIFATCCTFYVPLLVILFLYWKIYIIARKRI--Q 282

  Fly   357 KRAQTHLQQALNGTGSPSA---------------------PQAPPLG------------------ 382
            :|||......|..|...||                     .:.|..|                  
  Fly   283 RRAQKSFNVTLTETDCDSAVRELKKERSKRRAERKRLEAGERTPVDGDGTGGQLQRRTRKRMRIC 347

  Fly   383 -------------------------------------HTELASSGNGQRHSSVGNTSLT------ 404
                                                 .||.::| |....|..| |.||      
  Fly   348 FGRNTNTANVVAGSEGAVARSMAAIAVDFASLAITREETEFSTS-NYDNKSHAG-TELTTVSSDA 410

  Fly   405 --YST-------------------------------------CGGLS------------SGGGAL 418
              |.|                                     .||:.            ||.|.:
  Fly   411 DDYRTSNANEIITLSQQVAHATQHHLIASHLNAITPLAQSIAMGGVGCLTTTTPSEKALSGAGTV 475

  Fly   419 AGHGSGGGVSGS-------------TGL------LGSPHHKKLR----FQLAKEKKASTTLGIIM 460
            ||..:||..|||             .||      :.:||.|..:    .:..:|:||:.||.||.
  Fly   476 AGAVAGGSGSGSGEEGAGTEGKNAGVGLGGVLASIANPHQKLAKRRQLLEAKRERKAAQTLAIIT 540

  Fly   461 SAFTVCWLPFFILALIRPF-ETMHVPASLSSLFLWLGYANSLLNPIIYATLNRDFRKPFQEILY- 523
            .||.:||||||::||.... :...:..:::||||||||.||.|||:||...|.:||:.|:.||: 
  Fly   541 GAFVICWLPFFVMALTMSLCKECEIHTAVASLFLWLGYFNSTLNPVIYTIFNPEFRRAFKRILFG 605

  Fly   524 ------FRCSSLNTMMRENYYQDQY 542
                  .|.:.:...:::|  :|||
  Fly   606 RKAAARARSAKIXFQLKDN--EDQY 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_001263131.1 7tm_4 173..>342 CDD:304433 85/173 (49%)
7tm_1 179..507 CDD:278431 153/489 (31%)
5-HT1BNP_001137708.2 7tm_1 107..>288 CDD:278431 89/187 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470086
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BCYC
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002041
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24247
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3253
SonicParanoid 00.000 Not matched by this tool.
65.870

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