DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and HTR1F

DIOPT Version :9

Sequence 1:NP_001263131.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_000857.1 Gene:HTR1F / 3355 HGNCID:5292 Length:366 Species:Homo sapiens


Alignment Length:402 Identity:147/402 - (36%)
Similarity:212/402 - (52%) Gaps:58/402 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 SDTPLLLEEFAAGEFVLPPLTSIFVSIVLLIVILGTVVGNVLVCIAVCMVRKLRRPCNYLLVSLA 205
            ||..|..||....   :|  :.|.||:.|..:.|.|...|.||..|:.:.|||..|.|||:.|||
Human     7 SDQNLTSEELLNR---MP--SKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANYLICSLA 66

  Fly   206 LSDLCVALLVMPMALLYEVLEKWNFGPLLCDIWVSFDVLCCTASILNLCAISVDRYLAITKPLEY 270
            ::|..||:||||.:::|.|.|.|..|.::||||:|.|:.|||.|||:|.||::|||.|||..:||
Human    67 VTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEY 131

  Fly   271 GVKRTPRRMMLCVGIVWLAAACISLPPLL--ILGNEHEDEEGQPICTV-CQNFAYQIYATLGSFY 332
            ..||||:...:.:.|||:.:..||:|||.  ..|...:||     |.: ..:....||:|.|:||
Human   132 ARKRTPKHAGIMITIVWIISVFISMPPLFWRHQGTSRDDE-----CIIKHDHIVSTIYSTFGAFY 191

  Fly   333 IPLSVMLFVYYQIFRAAR---------RIVLEEKRAQTHLQQALNGTGSPSAPQAPPLGHTELAS 388
            |||:::|.:||:|:|||:         ||..||...|..|:.....|.|.|.........:: .|
Human   192 IPLALILILYYKIYRAAKTLYHKRQASRIAKEEVNGQVLLESGEKSTKSVSTSYVLEKSLSD-PS 255

  Fly   389 SGNGQRHSSVGNTSLTYSTCGGLSSGGGALAGHGSGGGVSGSTGLLGSPHHKKLRFQL---AKEK 450
            :...:.||:|.:....:.                               |.|..|.|.   .:|:
Human   256 TDFDKIHSTVRSLRSEFK-------------------------------HEKSWRRQKISGTRER 289

  Fly   451 KASTTLGIIMSAFTVCWLPFFILAL-IRPFETMHVPASLSSLFLWLGYANSLLNPIIYATLNRDF 514
            ||:||||:|:.||.:||||||:..| :...:...:...:|:...||||.|||:||:||...|.||
Human   290 KAATTLGLILGAFVICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFNEDF 354

  Fly   515 RKPFQEILYFRC 526
            :|.||:::..||
Human   355 KKAFQKLVRCRC 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_001263131.1 7tm_4 173..>342 CDD:304433 77/171 (45%)
7tm_1 179..507 CDD:278431 125/343 (36%)
HTR1FNP_000857.1 7tmA_5-HT1F 24..359 CDD:320456 137/371 (37%)
TM helix 1 26..50 CDD:320456 9/23 (39%)
TM helix 2 59..81 CDD:320456 13/21 (62%)
TM helix 3 97..119 CDD:320456 14/21 (67%)
Agonist binding. /evidence=ECO:0000250 99..108 4/8 (50%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250 120..122 1/1 (100%)
TM helix 4 142..158 CDD:320456 5/15 (33%)
TM helix 5 179..202 CDD:320456 10/22 (45%)
TM helix 6 292..314 CDD:320456 13/21 (62%)
Agonist binding. /evidence=ECO:0000250 306..310 3/3 (100%)
TM helix 7 326..351 CDD:320456 12/24 (50%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250 343..347 2/3 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm40316
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3253
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
43.900

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