DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and HTR1A

DIOPT Version :10

Sequence 1:NP_524599.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_000515.2 Gene:HTR1A / 3350 HGNCID:5286 Length:422 Species:Homo sapiens


Alignment Length:474 Identity:172/474 - (36%)
Similarity:243/474 - (51%) Gaps:95/474 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 STGSGSGSGSGSGS-GSGSGSYGLASMNSSPIAIVSYQGITSSNLGDSNTTLVPLSDTPLLLEEF 150
            |.|.|:.:.|.... .:|..:.|::.:.      ||||.|||..||                   
Human     5 SPGQGNNTTSPPAPFETGGNTTGISDVT------VSYQVITSLLLG------------------- 44

  Fly   151 AAGEFVLPPLTSIFVSIVLLIVILGTVVGNVLVCIAVCMVRKLRRPCNYLLVSLALSDLCVALLV 215
                      |.||.:          |:||..|..|:.:.|.|:...|||:.|||::||.|::||
Human    45 ----------TLIFCA----------VLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV 89

  Fly   216 MPMALLYEVLEKWNFGPLLCDIWVSFDVLCCTASILNLCAISVDRYLAITKPLEYGVKRTPRRMM 280
            :|||.||:||.||..|.:.||::::.||||||:|||:||||::|||.|||.|::|..||||||..
Human    90 LPMAALYQVLNKWTLGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAA 154

  Fly   281 LCVGIVWLAAACISLPPLLILG-NEHEDEEGQPICTVCQNFAYQIYATLGSFYIPLSVMLFVYYQ 344
            ..:.:.||....||:||:  || ...||......||:.::..|.||:|.|:|||||.:||.:|.:
Human   155 ALISLTWLIGFLISIPPM--LGWRTPEDRSDPDACTISKDHGYTIYSTFGAFYIPLLLMLVLYGR 217

  Fly   345 IFRAAR-RIVLEEKRAQTHLQQALNGTGSPSAPQAPPLGHTELASSG-NGQRHSSVGNTSLTYST 407
            |||||| ||....|:.:.        ||:.:...|.|....:.:.:| :|.|:..:|    ..|.
Human   218 IFRAARFRIRKTVKKVEK--------TGADTRHGASPAPQPKKSVNGESGSRNWRLG----VESK 270

  Fly   408 CGGLSSGGGALAGHGSGGG--------VSGSTGLLGSPH--------------------HKKLRF 444
            .||.....||:.....|..        |..|...|..|.                    ..|.:.
Human   271 AGGALCANGAVRQGDDGAALEVIEVHRVGNSKEHLPLPSEAGPTPCAPASFERKNERNAEAKRKM 335

  Fly   445 QLAKEKKASTTLGIIMSAFTVCWLPFFILALIRPF--ETMHVPASLSSLFLWLGYANSLLNPIIY 507
            .||:|:|...||||||..|.:|||||||:||:.||  .:.|:|..|.::..||||:||||||:||
Human   336 ALARERKTVKTLGIIMGTFILCWLPFFIVALVLPFCESSCHMPTLLGAIINWLGYSNSLLNPVIY 400

  Fly   508 ATLNRDFRKPFQEILYFRC 526
            |..|:||:..|::|:  :|
Human   401 AYFNKDFQNAFKKII--KC 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_524599.1 7tmA_5-HT7 163..518 CDD:320452 153/387 (40%)
TM helix 1 164..190 CDD:320452 6/25 (24%)
TM helix 2 197..223 CDD:320452 15/25 (60%)
TM helix 3 235..265 CDD:320452 19/29 (66%)
TM helix 4 277..299 CDD:320452 8/21 (38%)
TM helix 5 319..348 CDD:320452 15/28 (54%)
TM helix 6 447..477 CDD:320452 19/29 (66%)
TM helix 7 486..511 CDD:320452 14/24 (58%)
HTR1ANP_000515.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 4/17 (24%)
7tmA_5-HT1A_vertebrates 37..411 CDD:320453 159/426 (37%)
TM helix 1 38..64 CDD:320453 13/64 (20%)
TM helix 2 71..97 CDD:320453 15/25 (60%)
TM helix 3 109..139 CDD:320453 19/29 (66%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250|UniProtKB:P41595 133..135 1/1 (100%)
TM helix 4 151..173 CDD:320453 8/23 (35%)
TM helix 5 192..221 CDD:320453 15/28 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 235..262 6/34 (18%)
TM helix 6 338..368 CDD:320453 19/29 (66%)
TM helix 7 379..404 CDD:320453 14/24 (58%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 396..400 2/3 (67%)

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