DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and Htr1a

DIOPT Version :9

Sequence 1:NP_001263131.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_036717.1 Gene:Htr1a / 24473 RGDID:2845 Length:422 Species:Rattus norvegicus


Alignment Length:426 Identity:172/426 - (40%)
Similarity:239/426 - (56%) Gaps:58/426 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 SDTPLLLEEFAAGEFVLPPLTSI----FVSIVLLIVILGT-----VVGNVLVCIAVCMVRKLRRP 196
            ::|....|.|..|..|    |||    |...|:..::|||     |:||..|..|:.:.|.|:..
  Rat    10 NNTTASQEPFGTGGNV----TSISDVTFSYQVITSLLLGTLIFCAVLGNACVVAAIALERSLQNV 70

  Fly   197 CNYLLVSLALSDLCVALLVMPMALLYEVLEKWNFGPLLCDIWVSFDVLCCTASILNLCAISVDRY 261
            .|||:.|||::||.|::||:|||.||:||.||..|.:.||::::.||||||:|||:||||::|||
  Rat    71 ANYLIGSLAVTDLMVSVLVLPMAALYQVLNKWTLGQVTCDLFIALDVLCCTSSILHLCAIALDRY 135

  Fly   262 LAITKPLEYGVKRTPRRMMLCVGIVWLAAACISLPPLLILG-NEHEDEEGQPICTVCQNFAYQIY 325
            .|||.|::|..||||||....:.:.||....||:||:  || ...||......||:.::..|.||
  Rat   136 WAITDPIDYVNKRTPRRAAALISLTWLIGFLISIPPM--LGWRTPEDRSDPDACTISKDHGYTIY 198

  Fly   326 ATLGSFYIPLSVMLFVYYQIFRAAR-RI-----VLEEKRAQTHLQQALNGTGSPSAPQAPPLGHT 384
            :|.|:|||||.:||.:|.:|||||| ||     .:|:|.|.|.|     ||.|     |||...:
  Rat   199 STFGAFYIPLLLMLVLYGRIFRAARFRIRKTVRKVEKKGAGTSL-----GTSS-----APPPKKS 253

  Fly   385 ELASSGNGQRHSSVGNTSL-TYSTCGGLSSGG-------------GALAGH----GSGGGVSGST 431
            .....|:|.......|.:: |..|.|.:..|.             |....|    ...|..|.:.
  Rat   254 LNGQPGSGDWRRCAENRAVGTPCTNGAVRQGDDEATLEVIEVHRVGNSKEHLPLPSESGSNSYAP 318

  Fly   432 GLLGSPHHK----KLRFQLAKEKKASTTLGIIMSAFTVCWLPFFILALIRPF--ETMHVPASLSS 490
            ..|...:.:    |.:..||:|:|...||||||..|.:|||||||:||:.||  .:.|:||.|.:
  Rat   319 ACLERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPFCESSCHMPALLGA 383

  Fly   491 LFLWLGYANSLLNPIIYATLNRDFRKPFQEILYFRC 526
            :..||||:||||||:|||..|:||:..|::|:  :|
  Rat   384 IINWLGYSNSLLNPVIYAYFNKDFQNAFKKII--KC 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_001263131.1 7tm_4 173..>342 CDD:304433 84/174 (48%)
7tm_1 179..507 CDD:278431 149/358 (42%)
Htr1aNP_036717.1 7tm_4 48..>169 CDD:304433 60/120 (50%)
7tm_1 53..400 CDD:278431 149/358 (42%)
Agonist binding. /evidence=ECO:0000250 112..121 4/8 (50%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250 133..135 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 235..261 11/35 (31%)
Agonist binding. /evidence=ECO:0000250 358..362 3/3 (100%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250 396..400 2/3 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BCYC
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002041
OrthoInspector 1 1.000 - - otm44443
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.810

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