DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and Adrb2

DIOPT Version :10

Sequence 1:NP_524599.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_036624.2 Gene:Adrb2 / 24176 RGDID:2060 Length:418 Species:Rattus norvegicus


Alignment Length:433 Identity:135/433 - (31%)
Similarity:199/433 - (45%) Gaps:94/433 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 EFVLPPLTS----------------IFVSIVLLIVILGTVVGNVLVCIAVCMVRKLRRPCNYLLV 202
            :|:|.|..|                :.::|::.:::|..|.|||||..|:....:|:...||.:.
  Rat     9 DFLLAPNGSRAPGHDITQERDEAWVVGMAILMSVIVLAIVFGNVLVITAIAKFERLQTVTNYFIT 73

  Fly   203 SLALSDLCVALLVMPMALLYEVLEKWNFGPLLCDIWVSFDVLCCTASILNLCAISVDRYLAITKP 267
            |||.:||.:.|.|:|....:.:::.||||...|:.|.|.||||.||||..||.|:||||:|||.|
  Rat    74 SLACADLVMGLAVVPFGASHILMKMWNFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYVAITSP 138

  Fly   268 LEYGVKRTPRRMMLCVGIVWLAAACISLPPLLILGNEHEDEEG------QPICTVCQNFAYQIYA 326
            .:|....|..:..:.:.:||:.:...|..|:.:.......::.      :..|....|.||.|.:
  Rat   139 FKYQSLLTKNKARVVILMVWIVSGLTSFLPIQMHWYRATHKQAIDCYAKETCCDFFTNQAYAIAS 203

  Fly   327 TLGSFYIPLSVMLFVYYQIFRAARRIV--LEEKRAQTHLQQALNGTGSPSAPQAPPLGHTEL-AS 388
            ::.|||:||.||:|||.::|:.|:|.:  :::...:.|.|.               |...|. ..
  Rat   204 SIVSFYVPLVVMVFVYSRVFQVAKRQLQKIDKSEGRFHAQN---------------LSQVEQDGR 253

  Fly   389 SGNGQRHSSVGNTSLTYSTCGGLSSGGGALAGHGSGGGVSGSTGLLGSPHHKKLRFQLAKEKKAS 453
            ||:|.|.||                                             :|.| ||.||.
  Rat   254 SGHGLRRSS---------------------------------------------KFCL-KEHKAL 272

  Fly   454 TTLGIIMSAFTVCWLPFFILALIRPFETMHVPASLSSLFLWLGYANSLLNPIIYATLNRDFRKPF 518
            .||||||..||:|||||||:.::.......:|..:..|..||||.||..||:||.. :.|||..|
  Rat   273 KTLGIIMGTFTLCWLPFFIVNIVHVIRANLIPKEVYILLNWLGYVNSAFNPLIYCR-SPDFRIAF 336

  Fly   519 QEILYFRCSSLNT-----MMRENYYQDQYGEPPSQRVMLGDER 556
            ||:|..|.||..|     ....|...|..||..:.:  ||.|:
  Rat   337 QELLCLRRSSSKTYGNGYSSNSNGRTDYTGEQSAYQ--LGQEK 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_524599.1 7tmA_5-HT7 163..518 CDD:320452 116/363 (32%)
TM helix 1 164..190 CDD:320452 9/25 (36%)
TM helix 2 197..223 CDD:320452 10/25 (40%)
TM helix 3 235..265 CDD:320452 19/29 (66%)
TM helix 4 277..299 CDD:320452 4/21 (19%)
TM helix 5 319..348 CDD:320452 15/28 (54%)
TM helix 6 447..477 CDD:320452 19/29 (66%)
TM helix 7 486..511 CDD:320452 11/24 (46%)
Adrb2NP_036624.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 4/13 (31%)
7tmA_Beta2_AR 34..336 CDD:341355 116/363 (32%)
TM helix 1 35..61 CDD:341355 9/25 (36%)
TM helix 2 68..95 CDD:341355 10/26 (38%)
TM helix 3 106..136 CDD:341355 19/29 (66%)
TM helix 4 148..171 CDD:341355 4/22 (18%)
TM helix 5 196..228 CDD:341355 16/31 (52%)
TM helix 6 266..296 CDD:341355 20/30 (67%)
TM helix 7 305..330 CDD:341355 11/25 (44%)
PDZ-binding 415..418
Blue background indicates that the domain is not in the aligned region.

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