DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and Adra2b

DIOPT Version :10

Sequence 1:NP_524599.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_612514.2 Gene:Adra2b / 24174 RGDID:2057 Length:453 Species:Rattus norvegicus


Alignment Length:435 Identity:142/435 - (32%)
Similarity:205/435 - (47%) Gaps:87/435 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 VSIVLLIVILGTVVGNVLVCIAVCMVRKLRRPCNYLLVSLALSDLCVALLVMPMALLYEVLEKWN 229
            ::..:..:||.|:.||.||.:||...|.||.|.|..|||||.:|:.||.|::|.:|..|:|..|.
  Rat    20 IASAITFLILFTIFGNALVILAVLTSRSLRAPQNLFLVSLAAADILVATLIIPFSLANELLGYWY 84

  Fly   230 FGPLLCDIWVSFDVLCCTASILNLCAISVDRYLAITKPLEYGVKRTPRRMMLCVGIVWLAAACIS 294
            |....|:::::.|||.||:||::|||||:|||.|:::.|||..||||||:...:..|||.||.||
  Rat    85 FWRAWCEVYLALDVLFCTSSIVHLCAISLDRYWAVSRALEYNSKRTPRRIKCIILTVWLIAAVIS 149

  Fly   295 LPPLLILGNEHEDEEGQPICTVCQNFAYQIYATLGSFYIPLSVMLFVYYQIFRAARRIVL----- 354
            ||||:..|::..:..|.|.|.:.|...|.:.:::|||:.|..:|:.||.:|:..|:|...     
  Rat   150 LPPLIYKGDQRPEPRGLPQCELNQEAWYILASSIGSFFAPCLIMILVYLRIYVIAKRSHCRGLGA 214

  Fly   355 -------EEKRAQ----------------THLQQALNGTGSPSAPQAPPLGHT------------ 384
                   |.|:.|                :.|.......|.|..|:....|.|            
  Rat   215 KRGSGEGESKKPQPVAGGVPTSAKVPTLVSPLSSVGEANGHPKPPREKEEGETPEDPEARALPPT 279

  Fly   385 --ELASSGNGQRHSSVGNT---------------------SLTYSTCGG-----------LSSGG 415
              .|..||.||:..:.|.|                     :...|.|..           .:..|
  Rat   280 WSALPRSGQGQKKGTSGATAEEGDEEDEEEVEECEPQTLPASPASVCNPPLQQPQTSRVLATLRG 344

  Fly   416 GALAGHGSGGGVSGSTGLLGSPHHKKLRFQLAKEKKASTTLGIIMSAFTVCWLPFFI---LALIR 477
            ..|.|...|         :.|....:.|.||::||:.:..|.:::..|.|||.|||.   |..|.
  Rat   345 QVLLGKNVG---------VASGQWWRRRTQLSREKRFTFVLAVVIGVFVVCWFPFFFSYSLGAIC 400

  Fly   478 PFETMHVPASLSSLFLWLGYANSLLNPIIYATLNRDFRKPFQEIL 522
            | :...||..|...|.|:||.||.|||:||...|:|||:.|:.||
  Rat   401 P-QHCKVPHGLFQFFFWIGYCNSSLNPVIYTVFNQDFRRAFRRIL 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_524599.1 7tmA_5-HT7 163..518 CDD:320452 139/429 (32%)
TM helix 1 164..190 CDD:320452 9/24 (38%)
TM helix 2 197..223 CDD:320452 12/25 (48%)
TM helix 3 235..265 CDD:320452 17/29 (59%)
TM helix 4 277..299 CDD:320452 12/21 (57%)
TM helix 5 319..348 CDD:320452 9/28 (32%)
TM helix 6 447..477 CDD:320452 11/32 (34%)
TM helix 7 486..511 CDD:320452 12/24 (50%)
Adra2bNP_612514.2 7tmA_alpha2B_AR 12..440 CDD:320444 139/429 (32%)
TM helix 1 19..45 CDD:320444 9/24 (38%)
TM helix 2 52..78 CDD:320444 12/25 (48%)
TM helix 3 90..120 CDD:320444 17/29 (59%)
TM helix 4 132..155 CDD:320444 13/22 (59%)
TM helix 5 174..203 CDD:320444 9/28 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..331 18/117 (15%)
TM helix 6 367..397 CDD:320444 10/29 (34%)
TM helix 7 408..433 CDD:320444 12/24 (50%)

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