DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 5-HT7 and Adra1b

DIOPT Version :10

Sequence 1:NP_524599.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_058687.2 Gene:Adra1b / 24173 RGDID:2054 Length:515 Species:Rattus norvegicus


Alignment Length:413 Identity:139/413 - (33%)
Similarity:209/413 - (50%) Gaps:83/413 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 TSSNLGDSNTTLVPLSDTPLLLEEFAAGEFVLPPLTSIFVSIVLLIVILGTVVGNVLVCIAVCMV 190
            |..|...||:||..|..|                 .:|.|.:||...||..:|||:||.::|...
  Rat    26 TGPNQTSSNSTLPQLDVT-----------------RAISVGLVLGAFILFAIVGNILVILSVACN 73

  Fly   191 RKLRRPCNYLLVSLALSDLCVALLVMPMALLYEVLEKWNFGPLLCDIWVSFDVLCCTASILNLCA 255
            |.||.|.||.:|:||::||.::..|:|.:...|||..|..|.:.||||.:.||||||||||:|||
  Rat    74 RHLRTPTNYFIVNLAIADLLLSFTVLPFSATLEVLGYWVLGRIFCDIWAAVDVLCCTASILSLCA 138

  Fly   256 ISVDRYLAITKPLEYGVKRTPRRMMLCVGIVWLAAACISLPPLLILG----NEHEDEEGQPICTV 316
            ||:|||:.:...|:|....|.|:.:|.:..||:.:..||:.||  ||    ..::|:|    |.|
  Rat   139 ISIDRYIGVRYSLQYPTLVTRRKAILALLSVWVLSTVISIGPL--LGWKEPAPNDDKE----CGV 197

  Fly   317 CQNFAYQIYATLGSFYIPLSVMLFVYYQIFRAARRI-------VLEEKRAQTHLQQALNGTGSPS 374
            .:...|.::::||||||||:|:|.:|.:::..|:|.       |::|......|...::....  
  Rat   198 TEEPFYALFSSLGSFYIPLAVILVMYCRVYIVAKRTTKNLEAGVMKEMSNSKELTLRIHSKNF-- 260

  Fly   375 APQAPPLGHTELASSGNGQRHSSVGNTSLTYSTCGGLSSGGGALAGHGSGGGVSGSTGLLGSPHH 439
                    |.:..||...:.|:...:.::                                    
  Rat   261 --------HEDTLSSTKAKGHNPRSSIAV------------------------------------ 281

  Fly   440 KKLRFQLAKEKKASTTLGIIMSAFTVCWLPFFI-LALIRPFETMHVPASLSSLFLWLGYANSLLN 503
             || |:.::||||:.||||::..|.:||||||| |.|...|.|:..|.::..:..||||.||.||
  Rat   282 -KL-FKFSREKKAAKTLGIVVGMFILCWLPFFIALPLGSLFSTLKPPDAVFKVVFWLGYFNSCLN 344

  Fly   504 PIIYATLNRDFRKPFQEILYFRC 526
            ||||...:::|::.|..||..:|
  Rat   345 PIIYPCSSKEFKRAFMRILGCQC 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_524599.1 7tmA_5-HT7 163..518 CDD:320452 127/366 (35%)
TM helix 1 164..190 CDD:320452 11/25 (44%)
TM helix 2 197..223 CDD:320452 9/25 (36%)
TM helix 3 235..265 CDD:320452 22/29 (76%)
TM helix 4 277..299 CDD:320452 7/21 (33%)
TM helix 5 319..348 CDD:320452 12/28 (43%)
TM helix 6 447..477 CDD:320452 18/30 (60%)
TM helix 7 486..511 CDD:320452 12/24 (50%)
Adra1bNP_058687.2 7tmA_alpha1B_AR 46..359 CDD:320449 127/366 (35%)
TM helix 1 47..73 CDD:320449 11/25 (44%)
TM helix 2 80..106 CDD:320449 9/25 (36%)
TM helix 3 118..148 CDD:320449 22/29 (76%)
TM helix 4 160..183 CDD:320449 8/24 (33%)
TM helix 5 200..229 CDD:320449 12/28 (43%)
TM helix 6 287..317 CDD:320449 17/29 (59%)
TM helix 7 327..352 CDD:320449 12/24 (50%)
Nuclear localization signal. /evidence=ECO:0000250 368..378 139/413 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 392..430
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 474..515
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.