DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and ser-2

DIOPT Version :9

Sequence 1:NP_001263131.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001024339.1 Gene:ser-2 / 182110 WormBaseID:WBGene00004777 Length:455 Species:Caenorhabditis elegans


Alignment Length:422 Identity:149/422 - (35%)
Similarity:228/422 - (54%) Gaps:47/422 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 SNTTLVPLSDTPLLLEEFAAGEFVLPPLTSIFVSIVLLIVILGTVVGNVLVCIAVCMVRKLRRPC 197
            |.|||.|| |.|:...:..:   ::|.:..:..:|..|::|..|||||.||.:||...|.|::..
 Worm    32 STTTLPPL-DIPMTSMKPPS---IIPTVELVLGTITYLVIIAMTVVGNTLVVVAVFSYRPLKKVQ 92

  Fly   198 NYLLVSLALSDLCVALLVMPM-ALLYEVLEKWNFGPLLCDIWVSFDVLCCTASILNLCAISVDRY 261
            ||.|||||.|||.||:.|||: .:.:....||..|..:|..:.:.|:|.||:||||||||::|||
 Worm    93 NYFLVSLAASDLAVAIFVMPLHVVTFLAGGKWLLGVTVCQFFTTADILLCTSSILNLCAIALDRY 157

  Fly   262 LAITKPLEYGVKRTPRRMMLCVGIVWLAAACISLPPLLILG-NEHEDEEGQPICTVCQNFAYQIY 325
            .||..|:.|..|||.:.:.:.:.|||:.:..||:||  |:| |..::...:..|.:....|:.::
 Worm   158 WAIHNPINYAQKRTTKFVCIVIVIVWILSMLISVPP--IIGWNNWQENMMEDSCGLSTEKAFVVF 220

  Fly   326 ATLGSFYIPLSVMLFVYYQIFRAARRIVLEEKRAQTHLQQALNGTGSPSAPQAPPLGHTELASSG 390
            :..|||::||.||:.||.:||.:||:.: ...|.::.|.:..|..|.....:.    ..:.||..
 Worm   221 SAAGSFFLPLLVMVVVYVKIFISARQRI-RTNRGRSALMRIQNAEGDDDYRKM----SIKRASVE 280

  Fly   391 NGQRHSSVGNTS--------LTYSTCGGLSSGGGALAG---------HGSGG------------G 426
            :.:..|.||..:        .|.:|....|:.||:|..         |.:|.            |
 Worm   281 SARTSSRVGEKTPLVIADGQTTVTTLAAHSTDGGSLPKDETTKHMKYHNNGSCKVKVKDVKEDEG 345

  Fly   427 VSGSTGLLGSPHHKKLRFQLAKEKKASTTLGIIMSAFTVCWLPFFILALIRPF-ETMHVPASLSS 490
            ....|.:|    .|:.:..:||||:|:.|:.:|:..|:.||||||:..:|||| ||..:.|.:..
 Worm   346 NPNPTAVL----RKREKISVAKEKRAAKTIAVIIFVFSFCWLPFFVAYVIRPFCETCKLHAKVEQ 406

  Fly   491 LFLWLGYANSLLNPIIYATLNRDFRKPFQEIL 522
            .|.||||.||.|||.:|..||.:||:.|::||
 Worm   407 AFTWLGYINSSLNPFLYGILNLEFRRAFKKIL 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_001263131.1 7tm_4 173..>342 CDD:304433 72/170 (42%)
7tm_1 179..507 CDD:278431 126/359 (35%)
ser-2NP_001024339.1 7tm_1 74..423 CDD:278431 126/359 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002041
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3253
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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