DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 5-HT7 and Htr7

DIOPT Version :9

Sequence 1:NP_001263131.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001334371.1 Gene:Htr7 / 15566 MGIID:99841 Length:470 Species:Mus musculus


Alignment Length:378 Identity:149/378 - (39%)
Similarity:210/378 - (55%) Gaps:62/378 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 IFVSIVLLIVILGTVVGNVLVCIAVCMVRKLRRPCNYLLVSLALSDLCVALLVMPMALLYEVL-E 226
            :.:..:|.::.|.|:.||.||.|:||.|:|||:|.|||:|||||:||.||:.|||...:.::: .
Mouse    85 VVIGSILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAVMPFVSVTDLIGG 149

  Fly   227 KWNFGPLLCDIWVSFDVLCCTASILNLCAISVDRYLAITKPLEYGVKRTPRRMMLCVGIVWLAAA 291
            ||.||...|:::::.||:||||||:.||.||:||||.||:||.|.|::..:.|...:..|||.:|
Mouse   150 KWIFGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVWLLSA 214

  Fly   292 CISLPPLLILGNEHEDEEGQPICTVCQNFAYQIYATLGSFYIPLSVMLFVYYQIFRAARRIVLEE 356
            .|:||||........|::   :|.:.|:|.|.||:|..:||||:|||||:||||::|||:...:.
Mouse   215 SITLPPLFGWAQNVNDDK---VCLISQDFGYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKH 276

  Fly   357 K-----RAQTHLQQALNGTGSPSAPQAPPLGHTELASSGNGQRHSSVGNTSLTYSTCGGLSSGGG 416
            |     |.|.....:|||                            |.........|..||.   
Mouse   277 KFSGFPRVQPESVISLNG----------------------------VVKLQKEVEECANLSR--- 310

  Fly   417 ALAGHGSGGGVSGSTGLLGSPHHKKLRFQLAKEKKASTTLGIIMSAFTVCWLPFFILALIRPF-- 479
                            ||  .|.:|......:|:||:||||||:.||||||||||:|:..|||  
Mouse   311 ----------------LL--KHERKNISIFKREQKAATTLGIIVGAFTVCWLPFFLLSTARPFIC 357

  Fly   480 --ETMHVPASLSSLFLWLGYANSLLNPIIYATLNRDFRKPFQEILYFRCSSLN 530
              ....:|..:....|||||||||:||.|||..|||.|..::.:|..:..::|
Mouse   358 GTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQYRNIN 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_001263131.1 7tm_4 173..>342 CDD:304433 83/169 (49%)
7tm_1 179..507 CDD:278431 137/337 (41%)
Htr7NP_001334371.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849922
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H20244
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_106732
Panther 1 1.100 - - LDO PTHR24247
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3253
SonicParanoid 1 1.000 - - X1464
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.870

Return to query results.
Submit another query.