DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and Htr6

DIOPT Version :9

Sequence 1:NP_001263131.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001364025.1 Gene:Htr6 / 15565 MGIID:1196627 Length:440 Species:Mus musculus


Alignment Length:366 Identity:121/366 - (33%)
Similarity:167/366 - (45%) Gaps:61/366 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 PPLT--SIFVSIVLLIVILGTVVGNVLVCIAVCMVRKLRRPCNYLLVSLALSDLCVALLVMPMAL 220
            ||..  |.:|:..|.:||:.|...|.|:...:|....||...|:.||||..|||.|.|:|||.|:
Mouse    20 PPAPGGSGWVAAALCVVIVLTAAANSLLIALICTQPALRNTSNFFLVSLFTSDLMVGLVVMPPAM 84

  Fly   221 LYEVLEKWNFGPLLCDIWVSFDVLCCTASILNLCAISVDRYLAITKPLEYGVKRT-PRRMMLCVG 284
            |..:..:|.....||.:|.:|||:||:|||||||.||:||||.|..||.|.::.| ||.:.|.:|
Mouse    85 LNALYGRWVLARGLCLLWTAFDVMCCSASILNLCLISLDRYLLILSPLRYKLRMTAPRALALILG 149

  Fly   285 IVWLAAACISLPPLLI----LGNEHEDEEGQPICTVCQNFAYQIYATLGSFYIPLSVMLFVYYQI 345
             .|..||..|..|||:    ||.......||  |.:..:..|.:.|:..:|::|...:.|.|.:|
Mouse   150 -AWSLAALASFLPLLLGWHELGKARTSAPGQ--CRLLASLPYVLVASGVTFFLPSGAICFTYCRI 211

  Fly   346 FRAARRIVLEEKRAQTHLQQALNGTGSPSAPQAPPLGHTELASSGNGQRHSSVGNTSLTYSTCGG 410
            ..|||:..::.....|....|.....:...|:.|..|.....|.....:||              
Mouse   212 LLAARKQAVQVASLTTGTATAGQALETLQVPRTPRPGMESADSRRLTTKHS-------------- 262

  Fly   411 LSSGGGALAGHGSGGGVSGSTGLLGSPHHKKLRFQLAKEKKASTTLGIIMSAFTVCWLPFFILAL 475
                                                .|..|||.||||::|.|.|.|||||:.::
Mouse   263 ------------------------------------RKALKASLTLGILLSMFFVTWLPFFVASI 291

  Fly   476 IRPFETMHVPASLSSLFLWLGYANSLLNPIIYATLNRDFRK 516
            .:.......| .|..:..||||.||.:|||||....|||::
Mouse   292 AQAVCDCISP-GLFDVLTWLGYCNSTMNPIIYPLFMRDFKR 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_001263131.1 7tm_4 173..>342 CDD:304433 70/173 (40%)
7tm_1 179..507 CDD:278431 108/332 (33%)
Htr6NP_001364025.1 7tmA_5-HT6 29..333 CDD:320182 118/357 (33%)
TM helix 1 29..53 CDD:320182 7/23 (30%)
TM helix 2 62..84 CDD:320182 13/21 (62%)
TM helix 3 100..122 CDD:320182 14/21 (67%)
TM helix 4 145..161 CDD:320182 6/16 (38%)
TM helix 5 186..209 CDD:320182 5/22 (23%)
TM helix 6 269..291 CDD:320182 13/21 (62%)
TM helix 7 301..326 CDD:320182 13/25 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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