DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and Htr2b

DIOPT Version :10

Sequence 1:NP_524599.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_006529209.1 Gene:Htr2b / 15559 MGIID:109323 Length:495 Species:Mus musculus


Alignment Length:394 Identity:110/394 - (27%)
Similarity:188/394 - (47%) Gaps:65/394 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 FVSIVLLIVILGTVVGNVLVCIAVCMVRKLRRPCNYLLVSLALSDLCVALLVMPMALLYEVLEK- 227
            :.::::|.||:.|:.||:||.:||.:.::|:...||.|:|||::||.|.|.|||:|||..:.|. 
Mouse    55 WAALLILAVIIPTIGGNILVILAVALEKRLQYATNYFLMSLAIADLLVGLFVMPIALLTIMFEAI 119

  Fly   228 WNFGPLLCDIWVSFDVLCCTASILNLCAISVDRYLAITKPLEYGVKRTPRRMMLCVGIVWLAAAC 292
            |.....||..|:..|||..||||::|||||:|||:||.||::.....:.....:.:.:|||.:..
Mouse   120 WPLPLALCPAWLFLDVLFSTASIMHLCAISLDRYIAIKKPIQANQCNSRATAFIKITVVWLISIG 184

  Fly   293 ISLPPLLILGNEHEDEEGQPI----------------CTVCQN--FAYQIYATLGSFYIPLSVML 339
            :...||...|.........|:                |.:.::  .::.::.:|.:|:.||::|:
Mouse   185 MWGMPLFPYGQNASSGIAIPVPIKGIETDVINPHNVTCELTKDRFGSFMVFGSLAAFFAPLTIMV 249

  Fly   340 FVYY-QIFRAARRIVLEEKRAQTHLQQ------ALNGTGSPSAPQAPPLGHTELASSGNGQRHSS 397
            ..|: .|....::..|.:.:....|.:      .|....|.|:|:       ::|......|...
Mouse   250 VTYFLTIHTLQKKAYLVKNKPPQRLTRWTVPTVFLREDSSFSSPE-------KVAMLDGSHRDKI 307

  Fly   398 VGNTSLTYSTCGGLSSGGGALAGHGSGGGVSGSTGLLGSPHHKKLRFQLAKEKKASTTLGIIMSA 462
            :.|:| ..:....:||.|                        |:....::.|::||..||::...
Mouse   308 LPNSS-DETLMRRMSSVG------------------------KRSAQTISNEQRASKALGVVFFL 347

  Fly   463 FTVCWLPFFI----LALIRPFETMHVPASLSSLFLWLGYANSLLNPIIYATLNRDFRKPFQEILY 523
            |.:.|.||||    |||........: .:|..:|:|:||.:|.:||:||...|:.||:.|..  |
Mouse   348 FLLMWCPFFITNLTLALCDSCNQTTL-KTLLEIFVWIGYVSSGVNPLIYTLFNKTFREAFGR--Y 409

  Fly   524 FRCS 527
            ..|:
Mouse   410 ITCN 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_524599.1 7tmA_5-HT7 163..518 CDD:320452 107/383 (28%)
TM helix 1 164..190 CDD:320452 10/25 (40%)
TM helix 2 197..223 CDD:320452 16/25 (64%)
TM helix 3 235..265 CDD:320452 18/29 (62%)
TM helix 4 277..299 CDD:320452 4/21 (19%)
TM helix 5 319..348 CDD:320452 7/31 (23%)
TM helix 6 447..477 CDD:320452 14/33 (42%)
TM helix 7 486..511 CDD:320452 10/24 (42%)
Htr2bXP_006529209.1 7tm_GPCRs 54..413 CDD:475119 109/392 (28%)
TM helix 1 56..80 CDD:410628 10/23 (43%)
TM helix 2 89..111 CDD:410628 13/21 (62%)
TM helix 3 128..150 CDD:410628 12/21 (57%)
TM helix 4 173..205 CDD:410628 6/31 (19%)
TM helix 5 230..253 CDD:410628 5/22 (23%)
TM helix 6 338..360 CDD:410628 9/21 (43%)
TM helix 7 374..399 CDD:410628 10/24 (42%)

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