DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and Hrh2

DIOPT Version :10

Sequence 1:NP_524599.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001399939.1 Gene:Hrh2 / 15466 MGIID:108482 Length:421 Species:Mus musculus


Alignment Length:412 Identity:131/412 - (31%)
Similarity:191/412 - (46%) Gaps:101/412 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 IFVSIVLLIVILGTVVGNVLVCIAVCMVRKLRRPCNYLLVSLALSDLCVALLVMPMALLYEVLEK 227
            :.:|:||..:|..||.|||:||:||.:.|:||...|..:||||.:||.:.|||||.:.:|::..|
Mouse    19 VTISVVLTTLIFITVAGNVVVCLAVSLNRRLRSLTNCFIVSLAATDLLLGLLVMPFSAIYQLSFK 83

  Fly   228 WNFGPLLCDIWVSFDVLCCTASILNLCAISVDRYLAITKPLEYGVKRTPRRMMLCVGIVWLAAAC 292
            |:||.:.|:|:.|.||:.||||||||..||:|||.|:|.||.|.|..||.|:.:.:..:|:.:..
Mouse    84 WSFGQVFCNIYTSLDVMLCTASILNLFMISLDRYCAVTDPLRYPVLVTPVRVAISLVFIWVISIT 148

  Fly   293 ISLPPLLILGNEHEDEEGQP---ICTVCQNFAYQIYATLGSFYIPLSVMLFVYYQIFRAARRIVL 354
            :|...:.:..|......|..   .|.|..|..|.:...:.:||:||.:|...||:||:.||.   
Mouse   149 LSFLSIHLGWNSRNGTRGGNDTFKCKVQVNEVYGLVDGMVTFYLPLLIMCVTYYRIFKIARE--- 210

  Fly   355 EEKRAQTHLQQALNGTGSPSAPQAPPLGHTELASSGNGQRHSSVGNTSLTYSTCGGLSSGGGALA 419
                                  ||..:.|                           :||...|  
Mouse   211 ----------------------QAKRINH---------------------------ISSWKAA-- 224

  Fly   420 GHGSGGGVSGSTGLLGSPHHKKLRFQLAKEKKASTTLGIIMSAFTVCWLPFFILALIRPFE-TMH 483
                                      ..:|.||:.||..:|.||.|||.|:|...:.|... ...
Mouse   225 --------------------------TIREHKATVTLAAVMGAFIVCWFPYFTAFVYRGLRGDDA 263

  Fly   484 VPASLSSLFLWLGYANSLLNPIIYATLNRDFRKPFQEILYFRCSSLN---------------TMM 533
            |...:..:.||||||||.||||:|||||||||..:|::.:.:.:|.|               :..
Mouse   264 VNEVVEGIVLWLGYANSALNPILYATLNRDFRMAYQQLFHCKLASHNSHKTSLRLNNSLLSRSQS 328

  Fly   534 RENYYQDQYGEPPSQRVMLGDE 555
            ||..:|::  :|...:|..|.|
Mouse   329 REGRWQEE--KPLKLQVWSGTE 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_524599.1 7tmA_5-HT7 163..518 CDD:320452 121/358 (34%)
TM helix 1 164..190 CDD:320452 13/25 (52%)
TM helix 2 197..223 CDD:320452 12/25 (48%)
TM helix 3 235..265 CDD:320452 19/29 (66%)
TM helix 4 277..299 CDD:320452 3/21 (14%)
TM helix 5 319..348 CDD:320452 11/28 (39%)
TM helix 6 447..477 CDD:320452 13/29 (45%)
TM helix 7 486..511 CDD:320452 15/24 (63%)
Hrh2NP_001399939.1 7tmA_Histamine_H2R 19..298 CDD:320179 121/358 (34%)
TM helix 1 20..46 CDD:320179 13/25 (52%)
TM helix 2 53..80 CDD:320179 13/26 (50%)
TM helix 3 91..121 CDD:320179 19/29 (66%)
TM helix 4 133..153 CDD:320179 3/19 (16%)
TM helix 5 178..208 CDD:320179 11/29 (38%)
TM helix 6 226..256 CDD:320179 13/29 (45%)
TM helix 7 266..291 CDD:320179 15/24 (63%)

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