DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 5-HT7 and LOC1278365

DIOPT Version :10

Sequence 1:NP_524599.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_061513053.1 Gene:LOC1278365 / 1278365 VectorBaseID:AGAMI1_001113 Length:701 Species:Anopheles gambiae


Alignment Length:583 Identity:193/583 - (33%)
Similarity:276/583 - (47%) Gaps:110/583 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LSSWIAYAAGKATVPAPL-----------VEGETESATSQDFNSSSAFLGAIASASSTGSGSGSG 95
            ||:.::...|.||. |||           ..|||....:|...|:  :.....|...|...|.:.
Mosquito   122 LSTALSSPYGTATT-APLDGFTSEATLPTTHGETVHNLTQSLLSN--YTATDYSVDITNGSSLAP 183

  Fly    96 SGSGSGSGSGSYGL--------------ASMNSSPIAIVSY-----QGITSSNLGDSNTTLVPLS 141
            ..|....||.|.||              |..|.:...:::|     .|...::....|.|:.|..
Mosquito   184 DASTLARGSSSAGLSLSLPDLLEEDELMALWNCTNCFLLNYGAAAAAGANGTSKFYGNGTVDPRD 248

  Fly   142 DTPLLLEEFAAGEFVLPPLTSIFVSIVLLIVILGTVVGNVLVCIAVCMVRKLRRPCNYLLVSLAL 206
            ..|...::..|.|..:..:..|..:|||.||||.||:|||.|..|:.:.|.|:...|:|::|||:
Mosquito   249 VLPTGEDDILASETTIYLIRVIATAIVLGIVILATVIGNVFVIAAILLERNLQSVANHLILSLAV 313

  Fly   207 SDLCVALLVMPMALLYEVLEKWNFGPLLCDIWVSFDVLCCTASILNLCAISVDRYLAITKPLEYG 271
            :||.||.||||:..:|||.::|..|..|||:|.|.||||||||||:|.||::|||.|:| .::|.
Mosquito   314 ADLLVACLVMPLGAVYEVSKEWRLGADLCDMWTSSDVLCCTASILHLVAIALDRYWAVT-DIDYA 377

  Fly   272 VKRTPRRMMLCVGIVWLAAACISLPPLLILGN-EHEDEEGQPI-CTVCQNFAYQIYATLGSFYIP 334
            .:||.||:...:.|:|..:..:|:.|||...: |.|....|.: |.|.|:..|||:||..|||:|
Mosquito   378 HQRTARRIGYMIIIIWTLSVLVSIAPLLGWKDPEWETRVYQDLQCIVSQDVGYQIFATASSFYVP 442

  Fly   335 LSVMLFVYYQIFRAAR-RIVLEEKRAQTH--------------------------------LQQA 366
            |.|:||:|::||.||| ||...::.||||                                :...
Mosquito   443 LLVILFLYWRIFLAARKRIRRRQQAAQTHPEPLAKASCMALTSIGFRWKVTATQTASGGGMIANV 507

  Fly   367 LNGTGSPSAPQAPPLGH------------TELASSGNGQRHSSVGN---------------TSLT 404
            ..|:|..:|.....:|.            |.::|:.......|:||               .|:.
Mosquito   508 AGGSGGIAAAVVAVIGRPLPTISETTTAFTNVSSANTSPEKGSLGNGIERDRIEIDPPTADISMA 572

  Fly   405 YSTCGGLSSGGGALAGHGSGGGVSGSTGLLGSPHHKKLRFQL--AKEKKASTTLGIIMSAFTVCW 467
            |.:        |..|...|.....||:||..   .||.:...  .:|:||:.||.||..||..||
Mosquito   573 YPS--------GNQASCSSTTRPPGSSGLAS---RKKTQSSTDSKRERKAAKTLAIITGAFVCCW 626

  Fly   468 LPFFILALIRPFET-MHVPASLSSLFLWLGYANSLLNPIIYATLNRDFRKPFQEILYFRCSSL 529
            |||||:|::.|..| .::...::|:.|||||.||.||||||...:.:||..|:.||..|..||
Mosquito   627 LPFFIIAILLPTCTSCNISPLITSVCLWLGYFNSTLNPIIYTIFSPEFRHAFKRILCGRRYSL 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_524599.1 7tmA_5-HT7 163..518 CDD:320452 155/419 (37%)
TM helix 1 164..190 CDD:320452 14/25 (56%)
TM helix 2 197..223 CDD:320452 13/25 (52%)
TM helix 3 235..265 CDD:320452 21/29 (72%)
TM helix 4 277..299 CDD:320452 6/21 (29%)
TM helix 5 319..348 CDD:320452 16/28 (57%)
TM helix 6 447..477 CDD:320452 17/29 (59%)
TM helix 7 486..511 CDD:320452 14/24 (58%)
LOC1278365XP_061513053.1 None

Return to query results.
Submit another query.