DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and Adra1d

DIOPT Version :10

Sequence 1:NP_524599.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_038488.4 Gene:Adra1d / 11550 MGIID:106673 Length:562 Species:Mus musculus


Alignment Length:494 Identity:143/494 - (28%)
Similarity:230/494 - (46%) Gaps:72/494 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 SSAFLGAIASASSTGSGSGSGSGSGSGSGSGSYGLASMNSSPIAIVSYQGITSSNLGDSNTTLVP 139
            |..|.|..||:|:.|||:|.|:|:....|....|:.........:    |..|.....|:|....
Mouse     8 SVTFEGPRASSSTGGSGAGGGAGTVGPEGPAVGGVPGATGGSAVV----GTGSGEDNQSSTAEAG 68

  Fly   140 LSDTPLLLEEFAAGEFVLPPLTSIFVSIVLLIVILGTVVGNVLVCIAVCMVRKLRRPCNYLLVSL 204
            .:.:..:....|.|..|: ....:.|.:.|...||..|.||:||.::|...|.|:...||.:|:|
Mouse    69 AAASGEVNGSAAVGGLVV-SAQGVGVGVFLAAFILTAVAGNLLVILSVACNRHLQTVTNYFIVNL 132

  Fly   205 ALSDLCVALLVMPMALLYEVLEKWNFGPLLCDIWVSFDVLCCTASILNLCAISVDRYLAITKPLE 269
            |::||.::..|:|.:...|||..|.||...||:|.:.||||||||||:||.||||||:.:...|:
Mouse   133 AVADLLLSAAVLPFSATMEVLGFWAFGRTFCDVWAAVDVLCCTASILSLCTISVDRYVGVRHSLK 197

  Fly   270 YGVKRTPRRMMLCVGIVWLAAACISLPPLLILGNEHEDEEGQPICTVCQNFAYQIYATLGSFYIP 334
            |....|.|:....:.::|..|..:|:.||  ||.:......:..|.:.:...|.|::::.|||:|
Mouse   198 YPAIMTERKAAAILALLWAVALVVSVGPL--LGWKEPVPPDERFCGITEEVGYAIFSSVCSFYLP 260

  Fly   335 LSVMLFVYYQIFRAARRIV--LEE-------KRAQTHLQQALNGTGSPSAPQAPPLGHTELASSG 390
            ::|::.:|.:::..||...  ||.       |.::..|:....|..:              ::.|
Mouse   261 MAVIVVMYCRVYVVARSTTRSLEAGIKREPGKASEVVLRIHCRGAAT--------------SAKG 311

  Fly   391 NGQRHSSVGNTSLTYSTCGGLSSGGGALAGHGSGGGVSGSTGLLGSPHHKKLRFQLAKEKKASTT 455
            |....||.|:|                               |..|...:.|:|  ::||||:.|
Mouse   312 NPGTQSSKGHT-------------------------------LRSSLSVRLLKF--SREKKAAKT 343

  Fly   456 LGIIMSAFTVCWLP-FFILALIRPFETMHVPASLSSLFLWLGYANSLLNPIIYATLNRDFRKPFQ 519
            |.|::..|.:||.| ||:|.|...|..:.....:..:..||||.||.:||:||...:|:|::.|.
Mouse   344 LAIVVGVFVLCWFPFFFVLPLGSLFPQLKPSEGVFKVIFWLGYFNSCVNPLIYPCSSREFKRAFL 408

  Fly   520 EILYFRCSSLNTMMRENY---YQDQYGEP-----PSQRV 550
            .:|..:|......:...|   ::...|:|     ||.|:
Mouse   409 RLLRCQCRRRRRRLWRVYGHHWRASTGDPRSDCAPSPRI 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_524599.1 7tmA_5-HT7 163..518 CDD:320452 113/364 (31%)
TM helix 1 164..190 CDD:320452 10/25 (40%)
TM helix 2 197..223 CDD:320452 9/25 (36%)
TM helix 3 235..265 CDD:320452 21/29 (72%)
TM helix 4 277..299 CDD:320452 5/21 (24%)
TM helix 5 319..348 CDD:320452 8/28 (29%)
TM helix 6 447..477 CDD:320452 15/30 (50%)
TM helix 7 486..511 CDD:320452 10/24 (42%)
Adra1dNP_038488.4 7tm_GPCRs 91..407 CDD:475119 113/364 (31%)
TM helix 1 93..117 CDD:410628 10/23 (43%)
TM helix 2 126..148 CDD:410628 9/21 (43%)
TM helix 3 164..186 CDD:410628 15/21 (71%)
TM helix 4 209..225 CDD:410628 3/15 (20%)
TM helix 5 246..269 CDD:410628 7/22 (32%)
TM helix 6 341..363 CDD:410628 9/21 (43%)
TM helix 7 375..400 CDD:410628 10/24 (42%)

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