DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and adra1d

DIOPT Version :10

Sequence 1:NP_524599.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_002935531.2 Gene:adra1d / 100495969 XenbaseID:XB-GENE-6050827 Length:500 Species:Xenopus tropicalis


Alignment Length:415 Identity:128/415 - (30%)
Similarity:210/415 - (50%) Gaps:89/415 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 GDSNTTLVPLSDTPLLLEEFAAGEFV-----LPPLTSIFVSIVLLIVILGTVVGNVLVCIAVCMV 190
            ||::|            |:.|.|..:     ||.|:   |.|||.:.||..:|||::|.::|...
 Frog    21 GDNDT------------EDHANGTSLSLALDLPALS---VGIVLAVFILFAIVGNIMVILSVACN 70

  Fly   191 RKLRRPCNYLLVSLALSDLCVALLVMPMALLYEVLEKWNFGPLLCDIWVSFDVLCCTASILNLCA 255
            |:|:...||.:|:||::||.::..|:|.:...|||..|.||.:.||||.:.|||||||||::||.
 Frog    71 RQLQTVTNYFIVNLAIADLLLSTTVLPFSATLEVLGFWAFGRVFCDIWAAVDVLCCTASIMSLCV 135

  Fly   256 ISVDRYLAITKPLEYGVKRTPRRMMLCVGIVWLAAACISLPPLLILGNEHEDEEGQPICTVCQNF 320
            ||:|||:.:...|:|....|.::.::.:.::||::..||:.||  ||.:.........|::.:..
 Frog   136 ISIDRYVGVKYSLKYPTIMTEKKAVVILILLWLSSMVISIGPL--LGWKEPPPPDDSKCSITEEP 198

  Fly   321 AYQIYATLGSFYIPLSVMLFVYYQIFRAARRI-------VLEEKR------AQTHLQQALNGTGS 372
            .|.::::|.|||:||.|:|.:|::::..|||.       |.:|:.      .:.|.:..|..:.|
 Frog   199 GYALFSSLFSFYLPLLVILVMYFRVYIVARRTTKSLEAGVKKERNKSMEVVLRIHCRSVLEESSS 263

  Fly   373 PSAPQAPPLGHTELASSGNGQRHSSVGNTSLTYSTCGGLSSGGGALAGHGSGGGVSGSTGLLGSP 437
                           |:.|.:.|:...:.|:                                  
 Frog   264 ---------------STRNHKGHTFRSSLSV---------------------------------- 279

  Fly   438 HHKKLRFQLAKEKKASTTLGIIMSAFTVCWLPFF-ILALIRPFETMHVPASLSSLFLWLGYANSL 501
              :.|:|  ::||||:.||.|::..|.:|||||| ||.|...|..:....|:..:..||||.||.
 Frog   280 --RLLKF--SREKKAAKTLAIVVGVFILCWLPFFLILPLGSFFPALKPTDSVFKVIFWLGYFNSC 340

  Fly   502 LNPIIYATLNRDFRKPFQEILYFRC 526
            :|||||...:::|::.|..||..:|
 Frog   341 VNPIIYPCSSKEFKRAFIRILKCQC 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_524599.1 7tmA_5-HT7 163..518 CDD:320452 115/368 (31%)
TM helix 1 164..190 CDD:320452 11/25 (44%)
TM helix 2 197..223 CDD:320452 9/25 (36%)
TM helix 3 235..265 CDD:320452 20/29 (69%)
TM helix 4 277..299 CDD:320452 5/21 (24%)
TM helix 5 319..348 CDD:320452 10/28 (36%)
TM helix 6 447..477 CDD:320452 17/30 (57%)
TM helix 7 486..511 CDD:320452 12/24 (50%)
adra1dXP_002935531.2 7tmA_alpha1D_AR 43..357 CDD:320450 116/371 (31%)
TM helix 1 44..70 CDD:320450 11/28 (39%)
TM helix 2 77..103 CDD:320450 9/25 (36%)
TM helix 3 115..145 CDD:320450 20/29 (69%)
TM helix 4 157..180 CDD:320450 6/24 (25%)
TM helix 5 197..226 CDD:320450 10/28 (36%)
TM helix 6 285..315 CDD:320450 16/29 (55%)
TM helix 7 325..350 CDD:320450 12/24 (50%)

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