DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT7 and or90e2

DIOPT Version :10

Sequence 1:NP_524599.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001122033.1 Gene:or90e2 / 100148395 ZFINID:ZDB-GENE-070806-25 Length:310 Species:Danio rerio


Alignment Length:251 Identity:54/251 - (21%)
Similarity:97/251 - (38%) Gaps:68/251 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 LLIVILGTVVGNVLVCIAVCMVRK---LRRPCNYLLVSLALSD-----LCVALLVMPMALLYEVL 225
            :::|:.|..:.:::........|.   ...|...|.:.|.::|     |.|:|.||..|      
Zfish    22 VIVVVFGITINSIIGLFVFTFFRSSVFYNDPRYILYIHLVINDMLMVFLSVSLSVMAYA------ 80

  Fly   226 EKWNFGPL-LCDIWVSFDVLCCTASILNLCAISVDRYLAITKPLEYGVKRTPRRMMLCVGIVW-- 287
              |...|. .|.|.:.......|.::|.|..:|::||:||.|||.:....|.||..:.:.::|  
Zfish    81 --WQNVPFSFCVILLLIVAKTQTNTLLTLGGMSIERYIAICKPLHHHQICTVRRTYILISLIWSV 143

  Fly   288 -------------------LAAACISLPPLLILGNEHEDEEGQPICTVCQNFAYQIYATLGSFYI 333
                               :|.|.:..|..|.....||:         .:.:...|||:     .
Zfish   144 GVLPGLADFILLLLIDPSIIAKATVCTPAKLYNTPYHEE---------LKKYMSSIYAS-----A 194

  Fly   334 PLSVMLFVYYQIFRAARRIVLEE---KRAQTHLQQALNG-----------TGSPSA 375
            .|.::::.|.::...||:...::   |:||:.:  .|:|           |||..|
Zfish   195 VLLILIYTYCRVLITARKASTDKSSAKKAQSTI--LLHGAQLLLCMLSYITGSIEA 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT7NP_524599.1 7tmA_5-HT7 163..518 CDD:320452 54/251 (22%)
TM helix 1 164..190 CDD:320452 2/20 (10%)
TM helix 2 197..223 CDD:320452 9/30 (30%)
TM helix 3 235..265 CDD:320452 9/29 (31%)
TM helix 4 277..299 CDD:320452 6/42 (14%)
TM helix 5 319..348 CDD:320452 5/28 (18%)
TM helix 6 447..477 CDD:320452
TM helix 7 486..511 CDD:320452
or90e2NP_001122033.1 7tm_classA_rhodopsin-like 22..>214 CDD:410626 45/213 (21%)
TM helix 1 22..43 CDD:410626 2/20 (10%)
TM helix 2 53..79 CDD:410626 8/25 (32%)
TM helix 3 89..119 CDD:410626 9/29 (31%)
TM helix 4 132..151 CDD:410626 2/18 (11%)
TM helix 5 176..205 CDD:410626 7/42 (17%)
Blue background indicates that the domain is not in the aligned region.

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