DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ctr1C and LOC4577638

DIOPT Version :10

Sequence 1:NP_651837.1 Gene:Ctr1C / 43668 FlyBaseID:FBgn0062411 Length:270 Species:Drosophila melanogaster
Sequence 2:XP_061509752.1 Gene:LOC4577638 / 4577638 VectorBaseID:AGAMI1_007723 Length:210 Species:Anopheles gambiae


Alignment Length:215 Identity:48/215 - (22%)
Similarity:78/215 - (36%) Gaps:67/215 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 MSMAMFF--HTGDSETILFKFWRTESAMALTLSCLLIFMVAVLYEALKFFREWLFSWDRKRLAGG 123
            |.|:.::  :.||   :.|..........:...||.:..::|.||.||             :.|.
Mosquito     2 MHMSFWWGSNVGD---VFFSGLTVNGTGPMVALCLTLTALSVAYEGLK-------------IHGA 50

  Fly   124 RDQYNRPRRYREANYNYNQPTYPPRTNQQSGTQVYAYRPRSPSMPPLQPPGRSSPQAQSSLILTQ 188
            :   .|.|..||                         |.||.|.||          ::|:.:|:.
Mosquito    51 K---VRARTARE-------------------------RVRSASCPP----------SESATLLSL 77

  Fly   189 HTHHHVQENTPPAGRTTKLKVFCSGMHILQTFLHVLQVLISFLLMLVFMTFNVWLCVAVLLGAGV 253
            ...   ..|.|.:|.....::.......: |||  ...::.:.|||..|.:|.:|.|||:.|.|:
Mosquito    78 EGS---VSNGPLSGSNLSRRIRKLAAEAV-TFL--FHSMLGYALMLTVMVYNGYLFVAVVGGMGL 136

  Fly   254 GYYIFCAF-----RTNVQEH 268
            ||::|...     ..|:|.|
Mosquito   137 GYFLFGHLSMKVNMENIQAH 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctr1CNP_651837.1 Ctr 65..258 CDD:461194 42/194 (22%)
LOC4577638XP_061509752.1 None

Return to query results.
Submit another query.