DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctr1C and ctr4

DIOPT Version :9

Sequence 1:NP_651837.1 Gene:Ctr1C / 43668 FlyBaseID:FBgn0062411 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_587968.1 Gene:ctr4 / 2538731 PomBaseID:SPCC1393.10 Length:289 Species:Schizosaccharomyces pombe


Alignment Length:204 Identity:39/204 - (19%)
Similarity:76/204 - (37%) Gaps:77/204 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 MSMAMFFHTGDSETILFKFWRTESAMALTLSCLLIFMVAVLYEALKFFREWLFSWDRKRLAGGRD 125
            :||...::|.|: ..:.|.|...|......|   ||.:..:..||:..|.            |:.
pombe   120 LSMYWNWYTIDA-CFITKHWHITSKHMFVGS---IFGIIFMMMALELVRR------------GQR 168

  Fly   126 QYNR--PRRYREANYNYNQPTYPPRTNQ--QSGTQVYAYRPRSPSMPPLQPPGRSSPQAQSSLIL 186
            :::|  .||            :.|.:|.  .||..|::    .|||                   
pombe   169 EFDRWCVRR------------FSPASNSCCHSGAPVHS----GPSM------------------- 198

  Fly   187 TQHTHHHVQENTPPAGRTTKLKVFCSGMHILQTFLHVLQVLISFLLMLVFMTFNVWLCVAVLLGA 251
                               .|::|   :|.|::..:::|.:::::.||:.|.:|.::.:.:..|.
pombe   199 -------------------ALRIF---LHFLRSCFYLVQYIVAYIAMLLAMYYNGYVILFLFCGT 241

  Fly   252 GVGYYIFCA 260
            ..||::|.|
pombe   242 FFGYFLFGA 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ctr1CNP_651837.1 SelP_N <23..56 CDD:282453
Ctr 63..258 CDD:282057 36/198 (18%)
ctr4NP_587968.1 Ctr 121..248 CDD:282057 37/199 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 42 1.000 Domainoid score I3667
eggNOG 1 0.900 - - E1_KOG3386
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12483
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.870

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