DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and PHOX2B

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_003915.2 Gene:PHOX2B / 8929 HGNCID:9143 Length:314 Species:Homo sapiens


Alignment Length:230 Identity:77/230 - (33%)
Similarity:106/230 - (46%) Gaps:45/230 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 NDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRK 321
            |:|  ::|||.||.|||.||:|||..|:...|||:.||||:|:..:||||||:|||:|||||:||
Human    93 NEK--RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRK 155

  Fly   322 RERNAMNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNWTKVPSPLGTKPFPWPVNPLGSMVA 386
            :||.|..||.||.:..||..:...:.  |:|..:.....:.|..|.|   .|.|.|         
Human   156 QERAAAAAAAAAKNGSSGKKSDSSRD--DESKEAKSTDPDSTGGPGP---NPNPTP--------- 206

  Fly   387 GNHHQNSVNCFNTGASGVAVSMNNASMLPGSMGSSLSNTSNVGAVGAPCPYTTPANPYMYRSAAE 451
                    :|...|..|...|...|   ||:.|..       |..|.|           .:..|.
Human   207 --------SCGANGGGGGGPSPAGA---PGAAGPG-------GPGGEP-----------GKGGAA 242

  Fly   452 PCMSSSMSSSIATLRLKAKQHASAGFGSPYSAPSP 486
            ...:::.:::.|.....|...|:||......||.|
Human   243 AAAAAAAAAAAAAAAAAAGGLAAAGGPGQGWAPGP 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 35/55 (64%)
PHOX2BNP_003915.2 Homeodomain 99..155 CDD:459649 35/55 (64%)
polyalanine repeat 241..260 2/18 (11%)

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