DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and HB-1

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_174164.2 Gene:HB-1 / 839740 AraportID:AT1G28420 Length:1705 Species:Arabidopsis thaliana


Alignment Length:434 Identity:86/434 - (19%)
Similarity:154/434 - (35%) Gaps:141/434 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 GNRSVNETTIKTENISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYP 289
            |:.::|....|.:|.|||              .|.:.|.:|:.:|.|   ||:.||..:|..:||
plant    17 GDANLNNKKKKIDNNSSS--------------KDGRVKPKRQMKTPF---QLETLEKVYSEEKYP 64

  Fly   290 DMSTREEIAMWTNLTEARVRVWFKNRRAKWRK--RERNAMNAAVAAADFKSGFGTQFMQPFADDS 352
            ..:||.|::...:|::.::::||.:||.|.:|  :....:.::|||....|              
plant    65 SEATRAELSEKLDLSDRQLQMWFCHRRLKDKKDGQSNKPVKSSVAAVQSAS-------------- 115

  Fly   353 LYSSYPYNNWTKVPSPLGTKPFPWPVNPLGSMVAGNHHQNSVNCFNTGASGVAVSMNN------- 410
                     ..::|:..|:.|.....:..||....:.:.||...|.:|:|.....::.       
plant   116 ---------VNELPAAAGSVPEQDSRSDSGSESGCSPYSNSRRNFASGSSSSRAELDEYETMGKP 171

  Fly   411 ------ASM-------LPGSMGSSLSNTSNV----------GAVGAPC--------PYTT----- 439
                  ::|       :...:|..|.:...:          ||.|.|.        ||.:     
plant   172 SYESRLSTMVHRAIVCIEAQLGEPLRDDGPILGMEFDPLPPGAFGTPIAMQKHLLHPYESDLYER 236

  Fly   440 -----------------------PAN--PYMYRSAAEPCMSSSMSSSIATLRLKAKQHASAGFGS 479
                                   |::  |.||...:|. .:..|...:|..|:.:..||:.....
plant   237 HDPRPRRSHAAARSFHEQQSLDDPSSFTPNMYERYSEN-HARGMDYEVARSRISSFMHANGPVPR 300

  Fly   480 PYSAPSPVSRSNSAGLSACQYTGVGVTDVVXENALGALLNQHQHHLQHF---SGGSVGGSG---- 537
            .|..|...||:       |..:...:...: |:|         ||...|   ...||.|:.    
plant   301 SYVTPGHASRN-------CSTSQQDMPSPI-ESA---------HHGDRFLLEKDSSVLGTEDPYL 348

  Fly   538 VPNGMQQHSGNMLHHSNLGLDHSDLGLVGGGPSNHQDEGNHSLE 581
            :|:|:::.|.  :|......|    |.:|.|....::.|...||
plant   349 LPDGVRKSSD--VHRKGKIND----GRLGRGSETRENHGPKDLE 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 19/55 (35%)
HB-1NP_174164.2 Homeodomain 40..96 CDD:459649 20/58 (34%)
DDT 550..605 CDD:460696
HARE-HTH 731..799 CDD:461541
WHIM1 936..975 CDD:464774
WSD 1099..1173 CDD:464775
Blue background indicates that the domain is not in the aligned region.

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