DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and HB17

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_178252.2 Gene:HB17 / 814671 AraportID:AT2G01430 Length:275 Species:Arabidopsis thaliana


Alignment Length:168 Identity:42/168 - (25%)
Similarity:70/168 - (41%) Gaps:37/168 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 KLRIWAETGDFRDSHSSMTAVANSL---------DSTHLN------NFQTSSTS---SISNRSRD 221
            |||::.....|..|..::....|||         :|::|:      .|.:|..|   |...|.:.
plant    46 KLRVFLSNFTFSSSILALKNPNNSLIKIMAILPENSSNLDLTISVPGFSSSPLSDEGSGGGRDQL 110

  Fly   222 RKDGNRSVNETTIKTENISSSGHDEPMT-TSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSR 285
            |.|.||..:         |..|.||..: ..|..|.         |::...|.:|.:.||.:|.:
plant   111 RLDMNRLPS---------SEDGDDEEFSHDDGSAPP---------RKKLRLTREQSRLLEDSFRQ 157

  Fly   286 NRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRE 323
            |...:...:|.:|....|...::.|||:||||:.:.::
plant   158 NHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQ 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 17/55 (31%)
HB17NP_178252.2 HOX 136..192 CDD:197696 18/64 (28%)
HALZ 194..237 CDD:128634 0/2 (0%)

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