DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and PAX8

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_003457.1 Gene:PAX8 / 7849 HGNCID:8622 Length:450 Species:Homo sapiens


Alignment Length:402 Identity:80/402 - (19%)
Similarity:137/402 - (34%) Gaps:123/402 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 PAISSL-------------MPISSLSHLHHSAGQDLVGGYSQHPHHTVVPPHTPKHEPLEKLRIW 179
            |::||:             :|:.|.     .|.:.|..|::..|...|.||.:|:          
Human   123 PSVSSINRIIRTKVQQPFNLPMDSC-----VATKSLSPGHTLIPSSAVTPPESPQ---------- 172

  Fly   180 AETGDFRDSHSSMTAVANSLDSTH-LNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSG 243
                            ::||.||: :|.....:......|..|  |.::.....:|.::: ||||
Human   173 ----------------SDSLGSTYSINGLLGIAQPGSDKRKMD--DSDQDSCRLSIDSQS-SSSG 218

  Fly   244 HDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPD-----MSTREEIAMW--- 300
            ..:.:.|..                  |:...|:.||..|.|..||:     ..|:.|..::   
Human   219 PRKHLRTDA------------------FSQHHLEPLECPFERQHYPEAYASPSHTKGEQGLYPLP 265

  Fly   301 ---TNLTEARVRVWFKNRRAKWRKRERNAMNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNW 362
               :.|.:.:..:...|...   .|..:........||..|.|..:...|....|          
Human   266 LLNSTLDDGKATLTPSNTPL---GRNLSTHQTYPVVADPHSPFAIKQETPEVSSS---------- 317

  Fly   363 TKVPSPLGTKPFPWPVNPLGSMVAGNHHQNSVNCFNTGASGVAVSMNNASMLPG--SMGSSLSNT 425
            :..||.|.:..| ..:..:||.|.      ..|.|...|| |.......::|.|  .:|.:|.  
Human   318 SSTPSSLSSSAF-LDLQQVGSGVP------PFNAFPHAAS-VYGQFTGQALLSGREMVGPTLP-- 372

  Fly   426 SNVGAVGAPCPYTTPANPYMYRSAAEPCMSSSMSSSIATLRLKAKQHASAGFG-SPYSAPSPVSR 489
                  |.|        |::..|......||:::..:|     ..:::...:| :|||:.|...|
Human   373 ------GYP--------PHIPTSGQGSYASSAIAGMVA-----GSEYSGNAYGHTPYSSYSEAWR 418

  Fly   490 -SNSAGLSACQY 500
             .||:.||:..|
Human   419 FPNSSLLSSPYY 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 12/66 (18%)
PAX8NP_003457.1 PAX 9..133 CDD:128645 3/9 (33%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 12..68
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 87..135 3/11 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..222 18/91 (20%)
Pax2_C 337..449 CDD:463563 29/122 (24%)
Blue background indicates that the domain is not in the aligned region.

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