DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and SHOX2

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_003021.3 Gene:SHOX2 / 6474 HGNCID:10854 Length:355 Species:Homo sapiens


Alignment Length:504 Identity:121/504 - (24%)
Similarity:156/504 - (30%) Gaps:231/504 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DRSS----AVGGCGGGGGLGVGVVTSSATALGPGGLTNGGGGVVSGALNGLEAMSAESTGLCLQD 62
            ||||    |.||.|||||.|           |.||   |||||..|                   
Human    50 DRSSPAVRAAGGGGGGGGGG-----------GGGG---GGGGVGGG------------------- 81

  Fly    63 LVSAGTANGAGSAGSAESATTTSTALSSGSTGSSTVNGGGSSTSGTEHLHSHHSLHDSSSSVSIS 127
                |...|||...|.........|..|...||..:..|....:..|                  
Human    82 ----GAGGGAGGGRSPVRELDMGAAERSREPGSPRLTEGRRKPTKAE------------------ 124

  Fly   128 PAISSLMPISSLSHLHHSAGQDLVGGYSQHPHHTVVPPHTPKHEPLEKLRIWAETGDFRDSHSSM 192
            ...:.|:|..:...|                                                  
Human   125 VQATLLLPGEAFRFL-------------------------------------------------- 139

  Fly   193 TAVANSLDSTHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEPKN 257
                                  :|...:|||:                        ...|.|.:.
Human   140 ----------------------VSPELKDRKE------------------------DAKGMEDEG 158

  Fly   258 DKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKR 322
            ..|.| |||.||:||.:||.|||..|....|||...|||::....|:||||:|||:|||||.||:
Human   159 QTKIK-QRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 222

  Fly   323 ERNAMNAAV---AAADFKS-------GFGTQFMQPFADDSLYSSYPYNNWTKVPSPLGTKPFPWP 377
            | |.::..|   ||:.|::       ..|...| ||..||..:..|.:  .:|.:.|        
Human   223 E-NQLHKGVLIGAASQFEACRVAPYVNVGALRM-PFQQDSHCNVTPLS--FQVQAQL-------- 275

  Fly   378 VNPLGSMVAGNHHQNSVNCFNTGASGVAVSMNNASMLPGSMGSSLSNTSNVGAVGAPCPYTT-PA 441
              .|.|.||..||....:                                   :.|..||.. ||
Human   276 --QLDSAVAHAHHHLHPH-----------------------------------LAAHAPYMMFPA 303

  Fly   442 NPY---------------MYRSAAEPCMSSSMSSSIATLRLKAKQHASA 475
            .|:               ...:||....::|.:||||.||||||:||:|
Human   304 PPFGLPLATLAADSASAASVVAAAAAAKTTSKNSSIADLRLKAKKHAAA 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 31/55 (56%)
SHOX2NP_003021.3 Homeodomain 165..221 CDD:459649 31/55 (56%)
OAR 335..351 CDD:461067 11/15 (73%)

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