DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Sebox

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_076441.1 Gene:Sebox / 58922 RGDID:62077 Length:188 Species:Rattus norvegicus


Alignment Length:268 Identity:71/268 - (26%)
Similarity:97/268 - (36%) Gaps:97/268 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 PMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVW 311
            |...||..|        .||:||.|:..||.|||..|:...|||:||||.:|..|:|.||:::||
  Rat     9 PGCASGLGP--------HRRKRTTFSVGQLLELERVFAARPYPDISTREHLAQITHLPEAKIQVW 65

  Fly   312 FKNRRAKWRK-RERNAMNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNWTKVPSPLGTKPFP 375
            |:|||||..| |:..|:||.:                        ..|.|  ..:|.   |....
  Rat    66 FQNRRAKRIKDRKPGALNARL------------------------ELPPN--CSLPD---TPQLS 101

  Fly   376 WPVNPLGSMVAGNHHQNSVNCFNTGASGVAVSMNNASMLPGSMGSSLSNTSNVGAVGAPCPYTTP 440
            |.                                     ||:....|.:||:.....| ||..| 
  Rat   102 WD-------------------------------------PGTPSHPLHSTSSAQQTSA-CPPQT- 127

  Fly   441 ANPYMYRSAAEPCMSSSMSSSIATLRLKAKQHASAGFGSP-----YSAPSPVSRSNSAGLSACQY 500
                   |...|.:....|.|.|        .|:|.:|:.     :|....|.:::...||...|
  Rat   128 -------SCLAPILGPGQSWSGA--------KAAAPWGTSEVSGVHSLEQIVPQTSLGNLSDLIY 177

  Fly   501 TGVGVTDV 508
            |...||:|
  Rat   178 TSAIVTNV 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 31/55 (56%)
SeboxNP_076441.1 COG5576 <13..121 CDD:227863 49/181 (27%)
Homeodomain 19..72 CDD:459649 29/52 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 80..125 15/111 (14%)

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