DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and hoxb5b

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_571612.2 Gene:hoxb5b / 58052 ZFINID:ZDB-GENE-000823-6 Length:276 Species:Danio rerio


Alignment Length:302 Identity:78/302 - (25%)
Similarity:128/302 - (42%) Gaps:72/302 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 LVSAGTANGAGSAGSAESATTTSTALSSGSTGSSTVNGGGSSTSGTEHLHSHHSLHDSSSSVSIS 127
            |::.|| |||.:|...:     ||::.|||.|   .|..|...|.....:.|......:|....:
Zfish    21 LLNYGT-NGAMNASYRD-----STSMHSGSFG---YNYNGIDLSVNRPNNGHFGAVGDNSRAFQN 76

  Fly   128 P-----------AISSLMPISSLSHLHHSAGQDLVGGYSQHPHHTVVPPHTPKHEPLEKLRIWAE 181
            |           ::||..|:|..:    |...:|.|  |..|.....|                 
Zfish    77 PSQETRYRQSSCSLSSPDPLSCAT----SDTLELKG--SSPPSDQSTP----------------- 118

  Fly   182 TGDFRDSHSSMTAVANSLDSTHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDE 246
            ||:.|.::|      |:|.|::..:|..:..:::|  |...:....:....|.|.|::::|    
Zfish   119 TGNSRLTNS------NNLTSSNSTHFADTDETNVS--SETEEGAQTTTTSRTQKQESVATS---- 171

  Fly   247 PMTTS---GEEPK-----------NDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEI 297
              ||:   |:.|:           :|......:|.||.:|..|..|||..|..|||.....|.||
Zfish   172 --TTTPNDGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEI 234

  Fly   298 AMWTNLTEARVRVWFKNRRAKWRKRER-NAMNAAVAAADFKS 338
            |....|:|.::::||:|||.||:|..: .:|:.|.|.:.|::
Zfish   235 AHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQN 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 25/55 (45%)
hoxb5bNP_571612.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..182 30/155 (19%)
Antp-type hexapeptide 183..188 0/4 (0%)
Homeodomain 202..258 CDD:459649 25/55 (45%)

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