DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and phox2bb

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001014818.1 Gene:phox2bb / 544654 ZFINID:ZDB-GENE-050407-3 Length:284 Species:Danio rerio


Alignment Length:186 Identity:74/186 - (39%)
Similarity:96/186 - (51%) Gaps:26/186 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 NDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRK 321
            |:|  ::|||.||.|||.||:|||..|:...|||:.||||:|:..:||||||:|||:|||||:||
Zfish    93 NEK--RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRK 155

  Fly   322 RERNAMNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNWTKVPSPLGTKPFPWPV------NP 380
            :||.|..||.||   |:|.|.:      .||..........|...|..|..|.|.|.      :|
Zfish   156 QERAAAAAAAAA---KNGTGKK------SDSREEDSKEAKATDPDSTGGPGPNPNPTSNCGGPSP 211

  Fly   381 LGSMVA--GNHHQNSVNCFNTGASGVAVSMNNASMLPGSMGSSLSNTSNVGAVGAP 434
            .|..|:  ||.....|.....|....|.:...|| .||::      ||...::|.|
Zfish   212 TGGQVSATGNGPVEQVKTSVAGMGPTAPTQGWAS-APGTI------TSIPDSLGGP 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 35/55 (64%)
phox2bbNP_001014818.1 Homeodomain 99..155 CDD:459649 35/55 (64%)

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