DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Pitx2

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001035970.1 Gene:Pitx2 / 54284 RGDID:3331 Length:324 Species:Rattus norvegicus


Alignment Length:382 Identity:158/382 - (41%)
Similarity:193/382 - (50%) Gaps:99/382 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 HHSAGQDLVGGYSQHPHHT-------VVPPHTPKHEPLEKLRIWAETGDFRDSHSSMTAVANSLD 200
            |.:||..|....|...|||       |:.|..|:.....|.|:...|                  
  Rat    12 HRAAGTKLSAASSPFCHHTQALAMASVLAPGQPRSLDASKHRLEVHT------------------ 58

  Fly   201 STHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEPKNDKKNKRQR 265
                    .|.|||.....:|:  |.:..||..         |.::|           .|.||||
  Rat    59 --------ISDTSSPEVAEKDK--GQQGKNEDV---------GAEDP-----------SKKKRQR 93

  Fly   266 RQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRERNAMNAA 330
            |||||||||||||||.||.||||||||||||||:||||||||||||||||||||||||||..   
  Rat    94 RQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ--- 155

  Fly   331 VAAADFKSGFGTQF---MQPFADDSLYSSYPYNNWTK---VPSPLGTKPFPW----PVNPLGSMV 385
              |...|:|||.||   |||:  |.:|..|.||||..   ..:.|.||.||:    .||||.|..
  Rat   156 --AELCKNGFGPQFNGLMQPY--DDMYPGYSYNNWAAKGLTSASLSTKSFPFFNSMNVNPLSSQS 216

  Fly   386 AGNHHQNSVNCFNTGASGVAVSMNNASMLPGSMGSSLSNTSNV------GAVGAP-CPYTTPANP 443
            ..: ..||::..:..:|.|..::..   :|||..:||:|.:|:      .||..| |||..|..|
  Rat   217 MFS-PPNSISSMSMSSSMVPSAVTG---VPGSSLNSLNNLNNLSSPSLNSAVPTPACPYAPPTPP 277

  Fly   444 YMYRSAAEPCMSSSMSSSIATLRLKAKQHASAGFGSPYSAPSPVSRSNSAGLSACQY 500
            |:||   :.|     :||:|:||||||||:|.|:.   |..:|.|     .||||||
  Rat   278 YVYR---DTC-----NSSLASLRLKAKQHSSFGYA---SVQNPAS-----NLSACQY 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 52/55 (95%)
Pitx2NP_001035970.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 57..111 31/101 (31%)
Homeodomain 93..149 CDD:459649 52/55 (95%)
OAR 282..299 CDD:461067 11/21 (52%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 286..299 10/12 (83%)
Nuclear localization signal. /evidence=ECO:0000255 292..296 3/3 (100%)

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