DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and PAX2

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_003981.3 Gene:PAX2 / 5076 HGNCID:8616 Length:432 Species:Homo sapiens


Alignment Length:390 Identity:74/390 - (18%)
Similarity:114/390 - (29%) Gaps:157/390 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 PAISSLMPI--SSLSHLHHSAGQDLVGGYSQHPHHTVVPPHTPKHEPLEKLRIWAETGDFRDSHS 190
            |::||:..|  :.:....|.. .|..|.....|.||:||                         |
Human   130 PSVSSINRIIRTKVQQPFHPT-PDGAGTGVTAPGHTIVP-------------------------S 168

  Fly   191 SMTAVANSLDSTHLNNFQTSSTSSI--SNRSRDRKDGNRSVNETTIKTE--NISSSGHDEPMTT- 250
            :.:...:|..:..:.::..:....|  ||..:.::|      |..:.|:  :|...|....:.| 
Human   169 TASPPVSSASNDPVGSYSINGILGIPRSNGEKRKRD------EVEVYTDPAHIRGGGGLHLVWTL 227

  Fly   251 ----SGEEPKNDKK----NKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEAR 307
                .|..|..|.:    :.|:..:...||.|||:.|:..|.|..|||:                
Human   228 RDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEALDRVFERPSYPDV---------------- 276

  Fly   308 VRVWFKNRRAKWRKRERNAMNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNWTKVPSPLGTK 372
                |:                  |:...||..|.::..|.....|         .:|.|.|...
Human   277 ----FQ------------------ASEHIKSEQGNEYSLPALTPGL---------DEVKSSLSAS 310

  Fly   373 PFPWPVNP-LGSMVAGNHHQNSVNCFNTGASGVAVSMNNASMLPGSMGSSLSNTSNVGAVGAPCP 436
                 .|| |||.|:|                       ....|...|..:::|           
Human   311 -----TNPELGSNVSG-----------------------TQTYPVVTGRDMAST----------- 336

  Fly   437 YTTPANPYMYRSAAEPCMSSSMSSSIATLRLKAKQHASAGFGSPYSAPSPVSRSNSAGLSACQYT 501
             |.|..|        |.:..:...|..|..|......|...|:|||.|              |||
Human   337 -TLPGYP--------PHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHP--------------QYT 378

  Fly   502  501
            Human   379  378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 12/55 (22%)
PAX2NP_003981.3 PAX 16..140 CDD:128645 4/9 (44%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 19..75
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 94..142 4/11 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 304..325 9/48 (19%)
Pax2_C 305..>390 CDD:463563 28/136 (21%)
Blue background indicates that the domain is not in the aligned region.

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