DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Rhox8

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001020947.1 Gene:Rhox8 / 503423 RGDID:1561047 Length:178 Species:Rattus norvegicus


Alignment Length:117 Identity:46/117 - (39%)
Similarity:64/117 - (54%) Gaps:17/117 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 TSSTSSISNRSRDRKDGNRSVNETT--IKTENI--SSSGHDEPMTTSGEEPKNDKKNKRQRRQRT 269
            :|:::|:.:||   :||..|.|:..  .:.|.|  |:.||.......|:..:|          |.
  Rat    71 SSASASVDDRS---QDGGTSSNDQDKGQQKEPIPGSTKGHQASPRLPGQLSRN----------RH 122

  Fly   270 HFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRK 321
            .||..||||||..|.||.||..:.|.|:|.|..:||:||..|||:||||:||
  Rat   123 RFTEFQLQELERIFERNHYPSAAARRELARWIGVTESRVENWFKSRRAKYRK 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 29/55 (53%)
Rhox8NP_001020947.1 Homeodomain 119..174 CDD:459649 30/64 (47%)

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