DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Nobox

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001178942.1 Gene:Nobox / 502759 RGDID:1563929 Length:524 Species:Rattus norvegicus


Alignment Length:400 Identity:97/400 - (24%)
Similarity:140/400 - (35%) Gaps:101/400 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 SAGQDLVGGYSQHPHHTVVPPHTPKHEPL-----EKLRIWAETGDFRDSHSSMTAVANSLDSTHL 204
            :|.||..|           ||..|  .||     :||......|..:...|..:......|:..:
  Rat    22 TAAQDTEG-----------PPQDP--APLVQGDPDKLSSLPRAGLGKRPLSKTSGDCIDADTCRV 73

  Fly   205 NNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEP------KNDKKNKR 263
            :...:.:..|    .:.:|.|: |:.|.  |.|.:..|....|    |:.|      :.|.|.:.
  Rat    74 HTAPSPAVCS----PKPQKKGS-SLQEK--KAETVKPSMSAGP----GQVPNPLNFRERDLKKEP 127

  Fly   264 -------QRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRK 321
                   :::.||.:.|.||:|||..|..:.|||...|.|||....:|..|:.|||:||||||||
  Rat   128 LEATCQFRKKTRTLYRSDQLEELERIFQEDHYPDSDKRHEIAQMVGVTPQRIMVWFQNRRAKWRK 192

  Fly   322 ----RERNAMNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNWTKVPSPLGTKPFPWPVNPLG 382
                .|:...|...              .|.|:.|...|.|     ::..|:.|...|.||.|  
  Rat   193 VEKLNEKEDNNGPA--------------PPRANSSQCRSAP-----ELLGPMPTDLEPGPVPP-- 236

  Fly   383 SMVAGNHHQNSVNCFN------TGASGVAVSMNNASMLPGSMGSSLSNTSNVGAVGAPCPYTTPA 441
                    :|.::.|.      |....:..|.:|.|....::...|.:...:.....|    .|.
  Rat   237 --------ENILDGFTEPPVLLTSDQTLTSSQHNESAERVAVTPPLLSPPPIRRTNLP----LPL 289

  Fly   442 NPYMYRSAAEPCMSSSMSSSIATLRLKAKQHASAGFGSPYSAPSPVSRSNSAGLSACQYTGVGVT 506
            .|:.......|......|.||    .|.|...|.|    .|..||...||        ...:|..
  Rat   290 GPFQAPQVLPPLRDVPGSDSI----YKDKPCGSWG----TSITSPPIYSN--------LEDMGPQ 338

  Fly   507 DVVXENALGA 516
            |.. .|.||:
  Rat   339 DYQASNQLGS 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 27/55 (49%)
NoboxNP_001178942.1 Homeodomain 136..192 CDD:459649 27/55 (49%)

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