DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and Dlx6

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001414318.1 Gene:Dlx6 / 500023 RGDID:1561539 Length:298 Species:Rattus norvegicus


Alignment Length:307 Identity:71/307 - (23%)
Similarity:114/307 - (37%) Gaps:102/307 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 SHHSLHDSSSSVSISPAISSLMPISSLSHLHHSAGQDLVGGYSQHPHHTVVPPHTPKHEPLEKLR 177
            :|:.||...|:.:.:.|..        ||.||          .||.||     .:|         
  Rat    72 AHYPLHCLHSAAAAAAAAG--------SHHHH----------HQHHHH-----GSP--------- 104

  Fly   178 IWAETGDFRDSHSSMTA---VANSLDSTHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENI 239
             :|..|....:|.|:.|   :::|..|.:|.::..||.:     ::.|.|.......|.|:...|
  Rat   105 -YASGGGNSYNHRSLAAYPYMSHSQHSPYLQSYHNSSAA-----AQTRGDDTDQQKTTVIENGEI 163

  Fly   240 SSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLT 304
            ..:|                |.|:.|:.||.::|.|||.|.|.|.:.:|..:..|.|:|....||
  Rat   164 RFNG----------------KGKKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLT 212

  Fly   305 EARVRVWFKNRRAKWRKRERNAMNAAVAAADFKSGFGTQFMQPFADDSLYSSYPYNNWTKVPSPL 369
            :.:|::||:|:|:|::|..:...|                  |...|.|..|...:..:....|:
  Rat   213 QTQVKIWFQNKRSKFKKLLKQGSN------------------PHESDPLPGSAALSPRSPALPPV 259

  Fly   370 GTKPFPWPVNPLGSMVAGNHHQNSVNCFNTGASGVAVSMNNASMLPG 416
                  |.|:                     ||...|||...|.:||
  Rat   260 ------WDVS---------------------ASAKGVSMPPNSYMPG 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 22/55 (40%)
Dlx6NP_001414318.1 None

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