DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptx1 and hbn

DIOPT Version :10

Sequence 1:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster


Alignment Length:473 Identity:125/473 - (26%)
Similarity:174/473 - (36%) Gaps:162/473 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 TSGTEHLHSHHSLHD--------SSSSVSISPAISSLMPISSLSHLHHSAGQD-----LVGGYSQ 156
            |:.|...|.||.:..        ..|.||...|:.|:..|  |.:.|.....|     |:    .
  Fly     3 TTTTSQHHQHHPIMPPAMRPAPVQESPVSRPRAVYSIDQI--LGNQHQIKRSDTPSEVLI----T 61

  Fly   157 HPHHTVVPPHTPKHEPLEKLRIWAETGDFRDSHSSMTAVANSLDSTHLNNFQTSSTSSISNRSRD 221
            ||||.  .||...|                 .|||     ||..|.||::.|....|...:.|:.
  Fly    62 HPHHG--HPHHIHH-----------------LHSS-----NSNGSNHLSHQQQQQHSQQQHHSQQ 102

  Fly   222 RK------------------DGNRSVNETTIKTENISSS---GHDEPMTTSGEEPKNDKKNKRQR 265
            ::                  ||...|:    ..:.:|||   |||   .:..|.|      ::.|
  Fly   103 QQQQQQLQVQAKREDSPTNTDGGLDVD----NDDELSSSLNNGHD---LSDMERP------RKVR 154

  Fly   266 RQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRERNAMNAA 330
            |.||.||:.||.:||..|.:.:|||:.|||::||..:|:||||:|||:||||||||||: .||  
  Fly   155 RSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKREK-FMN-- 216

  Fly   331 VAAADFKSGF--GTQFMQPFADDSLYSSYPYNNWTKVPSPLGTKPFP---------------WP- 377
                ..|:|:  ..|.:..|                   |||. |.|               || 
  Fly   217 ----QDKAGYLLPEQGLPEF-------------------PLGI-PLPPHGLPGHPGSMQSEFWPP 257

  Fly   378 -------VNPLGSMVAG--------------NHH---------QNSVNCFNTGASGVAVSMNNAS 412
                   .||..:..||              |.|         .|....|..||:..|.:.:...
  Fly   258 HFALHQHFNPAAAAAAGLLPQHLMAPHYKLPNFHTLLSQYMGLSNLNGIFGAGAAAAAAAASAGY 322

  Fly   413 MLPGSMGSSLSNTSNVGAVGAPCPYTTPAN-----PYMYRSAAEPCMSSSMSSSIAT--LRLKAK 470
            ....|:.:.||..|.   |..||..::|..     |:.....|.|....:....:.|  |...|.
  Fly   323 PQNLSLHAGLSAMSQ---VSPPCSNSSPRESPKLVPHPTPPHATPPAGGNGGGGLLTGGLISTAA 384

  Fly   471 QHASAGFGSPYSAPSPVS 488
            |..::..|:..:|.:|||
  Fly   385 QSPNSAAGASSNASTPVS 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 33/55 (60%)
hbnNP_788420.1 Homeodomain 154..210 CDD:459649 33/55 (60%)

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